RAET1E 12585

Name: RAET1E	Sequence: fasta or formatted (263aa)		NCBI GI: 21040249
Description: retinoic acid early transcript 1E		Referenced in: HLA and Related Proteins Lectin Families
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.6 12 1 C cysteine 2.7 7 1 D aspartate 3.8 10 1 E glutamate 5.7 15 1 F phenylalanine 4.2 11 1 G glycine 6.5 17 2 H histidine 1.9 5 1 I isoleucine 5.3 14 2 K lysine 5.7 15 2 L leucine 14.4 38 5 M methionine 3.4 9 1 N asparagine 4.2 11 2 P proline 4.2 11 1 Q glutamine 3.8 10 1 R arginine 4.9 13 2 S serine 8.0 21 4 T threonine 5.7 15 1 V valine 4.9 13 1 W tryptophan 4.9 13 2 Y tyrosine 1.1 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 retinoic acid early transcript 1E ULBP1 0.256 UL16 binding protein 1 ULBP3 0.254 UL16 binding protein 3 RAET1G 0.200 retinoic acid early transcript 1G RAET1L 0.198 retinoic acid early transcript 1L ULBP2 0.197 UL16 binding protein 2 HFE 0.061 hemochromatosis protein isoform 6 precursor MICB 0.059 MHC class I polypeptide-related sequence B AZGP1 0.059 alpha-2-glycoprotein 1, zinc MICA 0.057 MHC class I polypeptide-related sequence A HFE 0.057 hemochromatosis protein isoform 1 precursor FCGRT 0.052 Fc fragment of IgG, receptor, transporter, alpha [H... FCGRT 0.052 Fc fragment of IgG, receptor, transporter, alpha [Hom... MR1 0.048 major histocompatibility complex, class I-related [Ho... HFE 0.036 hemochromatosis protein isoform 9 precursor HLA-B 0.032 major histocompatibility complex, class I, B precurs... HLA-A 0.032 major histocompatibility complex, class I, A precurs... HFE 0.031 hemochromatosis protein isoform 8 precursor HFE 0.029 hemochromatosis protein isoform 7 precursor HLA-E 0.027 major histocompatibility complex, class I, E precurs... HLA-G 0.021 major histocompatibility complex, class I, G precurso... SLC35B2 0.019 solute carrier family 35, member B2 HLA-F 0.015 major histocompatibility complex, class I, F isofor... HFE 0.013 hemochromatosis protein isoform 4 precursor HFE 0.013 hemochromatosis protein isoform 3 precursor LOC652614 0.013 PREDICTED: similar to MHC class I antigen C17orf55 0.010 hypothetical protein LOC284185 HLA-F 0.008 major histocompatibility complex, class I, F isofor... HLA-F 0.008 major histocompatibility complex, class I, F isofor... ITGB6 0.008 integrin, beta 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.