Guide to the Human Genome
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Name: AZGP1 Sequence: fasta or formatted (298aa) NCBI GI: 4502337
Description:

alpha-2-glycoprotein 1, zinc

Referenced in:

HLA and Related Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         19           2
 C cysteine            1.3          4           1
 D aspartate           6.0         18           1
 E glutamate           7.0         21           3
 F phenylalanine       3.0          9           2
 G glycine             5.7         17           1
 H histidine           2.3          7           1
 I isoleucine          3.0          9           1
 K lysine              6.7         20           3
 L leucine             8.7         26           5
 M methionine          1.7          5           1
 N asparagine          3.7         11           2
 P proline             6.7         20           2
 Q glutamine           6.7         20           1
 R arginine            4.4         13           1
 S serine              6.4         19           2
 T threonine           3.0          9           1
 V valine              8.4         25           3
 W tryptophan          2.7          8           1
 Y tyrosine            6.0         18           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alpha-2-glycoprotein 1, zinc 
HLA-B                 0.304   major histocompatibility complex, class I, B precurs...
HFE                   0.289   hemochromatosis protein isoform 1 precursor 
HLA-A                 0.287   major histocompatibility complex, class I, A precurs...
HLA-F                 0.277   major histocompatibility complex, class I, F isofor...
HLA-F                 0.277   major histocompatibility complex, class I, F isofor...
HLA-G                 0.277   major histocompatibility complex, class I, G precurso...
LOC652614             0.267   PREDICTED: similar to MHC class I antigen 
HLA-C                 0.264   major histocompatibility complex, class I, C precurs...
HFE                   0.264   hemochromatosis protein isoform 6 precursor 
MR1                   0.262   major histocompatibility complex, class I-related [Ho...
HFE                   0.255   hemochromatosis protein isoform 9 precursor 
HLA-E                 0.255   major histocompatibility complex, class I, E precurs...
HFE                   0.220   hemochromatosis protein isoform 7 precursor 
HFE                   0.195   hemochromatosis protein isoform 8 precursor 
FCGRT                 0.162   Fc fragment of IgG, receptor, transporter, alpha [H...
FCGRT                 0.162   Fc fragment of IgG, receptor, transporter, alpha [Hom...
HLA-F                 0.147   major histocompatibility complex, class I, F isofor...
MICB                  0.132   MHC class I polypeptide-related sequence B 
MICA                  0.122   MHC class I polypeptide-related sequence A 
CD1A                  0.105   CD1A antigen precursor 
HLA-DQB1              0.102   major histocompatibility complex, class II, DQ beta...
LOC100294318          0.095   PREDICTED: similar to major histocompatibility comp...
LOC100294318          0.095   PREDICTED: similar to major histocompatibility comp...
LOC100133583          0.095   PREDICTED: similar to major histocompatibility comp...
HFE                   0.090   hemochromatosis protein isoform 10 precursor 
HFE                   0.090   hemochromatosis protein isoform 4 precursor 
CD1D                  0.088   CD1D antigen precursor 
HFE                   0.080   hemochromatosis protein isoform 3 precursor 
CD1C                  0.080   CD1C antigen precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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