HLA-F 4797

Name: HLA-F	Sequence: fasta or formatted (442aa)		NCBI GI: 149158702
Description: major histocompatibility complex, class I, F isoform 1 precursor		Referenced in: HLA and Related Proteins
Other entries for this name: alt prot [346aa] major histocompatibility complex, class I, F isoform 2 precursor alt prot [254aa] major histocompatibility complex, class I, F isoform 3 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 38 3 C cysteine 1.1 5 1 D aspartate 4.5 20 2 E glutamate 6.6 29 2 F phenylalanine 4.1 18 2 G glycine 7.9 35 1 H histidine 2.9 13 2 I isoleucine 3.2 14 1 K lysine 2.3 10 2 L leucine 11.1 49 5 M methionine 1.8 8 1 N asparagine 2.0 9 1 P proline 4.5 20 2 Q glutamine 5.2 23 1 R arginine 8.4 37 2 S serine 6.1 27 2 T threonine 5.9 26 2 V valine 6.1 27 3 W tryptophan 3.6 16 2 Y tyrosine 4.1 18 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 major histocompatibility complex, class I, F isofor... HLA-F 0.774 major histocompatibility complex, class I, F isofor... HLA-A 0.621 major histocompatibility complex, class I, A precurs... HLA-B 0.609 major histocompatibility complex, class I, B precurs... HLA-G 0.593 major histocompatibility complex, class I, G precurso... HLA-C 0.590 major histocompatibility complex, class I, C precurs... HLA-E 0.556 major histocompatibility complex, class I, E precurs... LOC652614 0.485 PREDICTED: similar to MHC class I antigen HLA-F 0.444 major histocompatibility complex, class I, F isofor... MR1 0.221 major histocompatibility complex, class I-related [Ho... HFE 0.199 hemochromatosis protein isoform 1 precursor AZGP1 0.186 alpha-2-glycoprotein 1, zinc HFE 0.184 hemochromatosis protein isoform 9 precursor HFE 0.181 hemochromatosis protein isoform 6 precursor HFE 0.158 hemochromatosis protein isoform 7 precursor HFE 0.139 hemochromatosis protein isoform 8 precursor FCGRT 0.129 Fc fragment of IgG, receptor, transporter, alpha [H... FCGRT 0.129 Fc fragment of IgG, receptor, transporter, alpha [Hom... MICA 0.129 MHC class I polypeptide-related sequence A MICB 0.126 MHC class I polypeptide-related sequence B HFE 0.102 hemochromatosis protein isoform 10 precursor HFE 0.102 hemochromatosis protein isoform 4 precursor HFE 0.093 hemochromatosis protein isoform 3 precursor CD1A 0.064 CD1A antigen precursor LOC100294318 0.056 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.056 PREDICTED: similar to major histocompatibility comp... HLA-DMB 0.054 major histocompatibility complex, class II, DM beta p... LOC100133583 0.053 PREDICTED: similar to major histocompatibility comp... HLA-DPB1 0.051 major histocompatibility complex, class II, DP beta ... CD1D 0.048 CD1D antigen precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.