Guide to the Human Genome
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Name: SLC35B2 Sequence: fasta or formatted (432aa) NCBI GI: 30026034
Description:

solute carrier family 35, member B2

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         45           2
 C cysteine            2.3         10           1
 D aspartate           1.2          5           1
 E glutamate           4.2         18           1
 F phenylalanine       6.9         30           2
 G glycine             7.6         33           2
 H histidine           1.2          5           1
 I isoleucine          2.8         12           2
 K lysine              3.2         14           2
 L leucine            12.7         55           3
 M methionine          3.2         14           2
 N asparagine          1.6          7           1
 P proline             4.6         20           2
 Q glutamine           3.9         17           1
 R arginine            5.1         22           2
 S serine              8.3         36           2
 T threonine           5.8         25           2
 V valine              9.0         39           3
 W tryptophan          2.1          9           2
 Y tyrosine            3.7         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 35, member B2 
SLC35B1               0.128   solute carrier family 35, member B1 
SLC35B3               0.063   solute carrier family 35, member B3 
SLC35B3               0.063   solute carrier family 35, member B3 
SLC35B3               0.063   solute carrier family 35, member B3 
TMEM22                0.013   transmembrane protein 22 
TMEM22                0.013   transmembrane protein 22 
TMEM22                0.013   transmembrane protein 22 
SLC35B4               0.013   solute carrier family 35, member B4 
RAET1E                0.012   retinoic acid early transcript 1E 
SLC35F2               0.010   solute carrier family 35, member F2 
SLC35E4               0.010   solute carrier family 35, member E4 
BIRC6                 0.007   baculoviral IAP repeat-containing 6 
KIAA1919              0.006   sodium-dependent glucose transporter 1 
CDH23                 0.005   cadherin-like 23 isoform 1 precursor 
EMR1                  0.005   egf-like module containing, mucin-like, hormone rece...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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