MR1 28836

Name: MR1	Sequence: fasta or formatted (341aa)		NCBI GI: 4504417
Description: major histocompatibility complex, class I-related		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 17 1 C cysteine 1.5 5 1 D aspartate 4.7 16 1 E glutamate 7.3 25 3 F phenylalanine 3.2 11 1 G glycine 6.5 22 1 H histidine 4.1 14 1 I isoleucine 5.3 18 2 K lysine 3.8 13 1 L leucine 10.3 35 2 M methionine 2.9 10 1 N asparagine 2.9 10 1 P proline 5.6 19 2 Q glutamine 5.3 18 2 R arginine 5.6 19 3 S serine 5.6 19 2 T threonine 5.3 18 2 V valine 7.6 26 1 W tryptophan 2.9 10 1 Y tyrosine 4.7 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 major histocompatibility complex, class I-related [Ho... HLA-A 0.305 major histocompatibility complex, class I, A precurs... HLA-B 0.302 major histocompatibility complex, class I, B precurs... HLA-G 0.292 major histocompatibility complex, class I, G precurso... LOC652614 0.292 PREDICTED: similar to MHC class I antigen HLA-E 0.291 major histocompatibility complex, class I, E precurs... HLA-C 0.289 major histocompatibility complex, class I, C precurs... HFE 0.288 hemochromatosis protein isoform 1 precursor HLA-F 0.286 major histocompatibility complex, class I, F isofor... HLA-F 0.286 major histocompatibility complex, class I, F isofor... HFE 0.265 hemochromatosis protein isoform 9 precursor HFE 0.265 hemochromatosis protein isoform 6 precursor AZGP1 0.228 alpha-2-glycoprotein 1, zinc HFE 0.192 hemochromatosis protein isoform 7 precursor FCGRT 0.180 Fc fragment of IgG, receptor, transporter, alpha [H... FCGRT 0.180 Fc fragment of IgG, receptor, transporter, alpha [Hom... HFE 0.170 hemochromatosis protein isoform 8 precursor HLA-F 0.163 major histocompatibility complex, class I, F isofor... MICB 0.158 MHC class I polypeptide-related sequence B MICA 0.154 MHC class I polypeptide-related sequence A CD1A 0.113 CD1A antigen precursor HLA-DPB1 0.089 major histocompatibility complex, class II, DP beta ... HFE 0.089 hemochromatosis protein isoform 10 precursor HFE 0.089 hemochromatosis protein isoform 4 precursor HLA-DRB3 0.086 major histocompatibility complex, class II, DR beta ... LOC100294189 0.086 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.086 PREDICTED: similar to HLA class II histocompatibili... CD1D 0.086 CD1D antigen precursor LOC100294318 0.081 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.081 PREDICTED: similar to major histocompatibility comp... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.