CD1E 745

Name: CD1E	Sequence: fasta or formatted (321aa)		NCBI GI: 110618234
Description: CD1E antigen isoform d precursor		Referenced in: HLA and Related Proteins
Other entries for this name: alt prot [376aa] CD1E antigen isoform b precursor alt prot [290aa] CD1E antigen isoform c precursor alt prot [187aa] CD1E antigen isoform e precursor alt prot [101aa] CD1E antigen isoform f precursor alt prot [388aa] CD1E antigen isoform a precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 19 2 C cysteine 2.8 9 2 D aspartate 1.9 6 1 E glutamate 4.4 14 2 F phenylalanine 5.9 19 1 G glycine 7.5 24 2 H histidine 2.8 9 1 I isoleucine 5.3 17 1 K lysine 5.0 16 2 L leucine 13.7 44 3 M methionine 2.5 8 1 N asparagine 3.7 12 1 P proline 4.7 15 1 Q glutamine 7.5 24 1 R arginine 4.0 13 1 S serine 8.1 26 2 T threonine 3.4 11 1 V valine 5.3 17 3 W tryptophan 3.4 11 1 Y tyrosine 2.2 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CD1E antigen isoform d precursor CD1E 0.917 CD1E antigen isoform b precursor CD1E 0.903 CD1E antigen isoform a precursor CD1E 0.770 CD1E antigen isoform c precursor CD1B 0.372 CD1B antigen precursor CD1A 0.366 CD1A antigen precursor CD1D 0.347 CD1D antigen precursor CD1C 0.345 CD1C antigen precursor CD1E 0.253 CD1E antigen isoform e precursor CD1E 0.108 CD1E antigen isoform f precursor FCGRT 0.047 Fc fragment of IgG, receptor, transporter, alpha [H... FCGRT 0.047 Fc fragment of IgG, receptor, transporter, alpha [Hom... MR1 0.034 major histocompatibility complex, class I-related [Ho... HLA-A 0.028 major histocompatibility complex, class I, A precurs... HLA-G 0.023 major histocompatibility complex, class I, G precurso... HLA-F 0.022 major histocompatibility complex, class I, F isofor... HLA-F 0.022 major histocompatibility complex, class I, F isofor... HLA-C 0.022 major histocompatibility complex, class I, C precurs... HFE 0.019 hemochromatosis protein isoform 7 precursor LOC652614 0.019 PREDICTED: similar to MHC class I antigen HFE 0.017 hemochromatosis protein isoform 9 precursor HFE 0.017 hemochromatosis protein isoform 1 precursor OR11L1 0.016 olfactory receptor, family 11, subfamily L, member 1... HLA-E 0.014 major histocompatibility complex, class I, E precurs... AZGP1 0.014 alpha-2-glycoprotein 1, zinc LOC100294468 0.014 PREDICTED: similar to HLA class II histocompatibili... LOC100294189 0.014 PREDICTED: similar to HLA class II histocompatibili... LOC100294189 0.014 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.014 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.014 PREDICTED: similar to HLA class II histocompatibili... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.