CD1A 741

Name: CD1A	Sequence: fasta or formatted (327aa)		NCBI GI: 110618224
Description: CD1A antigen precursor		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 18 2 C cysteine 2.4 8 1 D aspartate 3.7 12 1 E glutamate 5.5 18 2 F phenylalanine 5.5 18 1 G glycine 8.0 26 2 H histidine 4.6 15 2 I isoleucine 4.3 14 2 K lysine 3.4 11 1 L leucine 13.1 43 4 M methionine 1.2 4 1 N asparagine 4.0 13 2 P proline 4.9 16 1 Q glutamine 5.2 17 2 R arginine 4.3 14 2 S serine 8.3 27 2 T threonine 3.7 12 1 V valine 6.1 20 1 W tryptophan 4.0 13 1 Y tyrosine 2.4 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CD1A antigen precursor CD1B 0.553 CD1B antigen precursor CD1C 0.547 CD1C antigen precursor CD1E 0.498 CD1E antigen isoform a precursor CD1E 0.498 CD1E antigen isoform b precursor CD1D 0.474 CD1D antigen precursor CD1E 0.406 CD1E antigen isoform c precursor CD1E 0.351 CD1E antigen isoform d precursor CD1E 0.238 CD1E antigen isoform e precursor CD1E 0.148 CD1E antigen isoform f precursor MR1 0.117 major histocompatibility complex, class I-related [Ho... LOC652614 0.105 PREDICTED: similar to MHC class I antigen HLA-A 0.100 major histocompatibility complex, class I, A precurs... AZGP1 0.094 alpha-2-glycoprotein 1, zinc HLA-G 0.093 major histocompatibility complex, class I, G precurso... HLA-E 0.091 major histocompatibility complex, class I, E precurs... HLA-C 0.087 major histocompatibility complex, class I, C precurs... HLA-F 0.085 major histocompatibility complex, class I, F isofor... HLA-F 0.085 major histocompatibility complex, class I, F isofor... FCGRT 0.084 Fc fragment of IgG, receptor, transporter, alpha [H... FCGRT 0.084 Fc fragment of IgG, receptor, transporter, alpha [Hom... HFE 0.082 hemochromatosis protein isoform 9 precursor HFE 0.082 hemochromatosis protein isoform 1 precursor HFE 0.073 hemochromatosis protein isoform 7 precursor HFE 0.072 hemochromatosis protein isoform 6 precursor HLA-B 0.069 major histocompatibility complex, class I, B precurs... HFE 0.063 hemochromatosis protein isoform 8 precursor HLA-DPB1 0.048 major histocompatibility complex, class II, DP beta ... MICA 0.046 MHC class I polypeptide-related sequence A HFE 0.045 hemochromatosis protein isoform 10 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.