CD1B 28397

Name: CD1B	Sequence: fasta or formatted (333aa)		NCBI GI: 4502645
Description: CD1B antigen precursor		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 23 2 C cysteine 2.1 7 1 D aspartate 3.9 13 2 E glutamate 4.8 16 2 F phenylalanine 5.1 17 1 G glycine 9.9 33 2 H histidine 1.8 6 1 I isoleucine 6.0 20 2 K lysine 3.0 10 1 L leucine 12.0 40 5 M methionine 1.8 6 1 N asparagine 2.7 9 1 P proline 5.4 18 1 Q glutamine 6.3 21 2 R arginine 4.5 15 3 S serine 8.1 27 2 T threonine 3.6 12 1 V valine 5.7 19 1 W tryptophan 3.3 11 1 Y tyrosine 3.0 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CD1B antigen precursor CD1C 0.569 CD1C antigen precursor CD1A 0.557 CD1A antigen precursor CD1E 0.502 CD1E antigen isoform a precursor CD1E 0.499 CD1E antigen isoform b precursor CD1D 0.472 CD1D antigen precursor CD1E 0.412 CD1E antigen isoform c precursor CD1E 0.359 CD1E antigen isoform d precursor CD1E 0.237 CD1E antigen isoform e precursor CD1E 0.149 CD1E antigen isoform f precursor FCGRT 0.077 Fc fragment of IgG, receptor, transporter, alpha [H... FCGRT 0.077 Fc fragment of IgG, receptor, transporter, alpha [Hom... MR1 0.075 major histocompatibility complex, class I-related [Ho... HLA-C 0.072 major histocompatibility complex, class I, C precurs... LOC652614 0.072 PREDICTED: similar to MHC class I antigen AZGP1 0.071 alpha-2-glycoprotein 1, zinc HLA-E 0.062 major histocompatibility complex, class I, E precurs... HLA-F 0.060 major histocompatibility complex, class I, F isofor... HLA-F 0.060 major histocompatibility complex, class I, F isofor... HLA-G 0.060 major histocompatibility complex, class I, G precurso... HFE 0.060 hemochromatosis protein isoform 9 precursor HFE 0.060 hemochromatosis protein isoform 1 precursor HLA-A 0.057 major histocompatibility complex, class I, A precurs... HFE 0.054 hemochromatosis protein isoform 7 precursor HLA-DPB1 0.054 major histocompatibility complex, class II, DP beta ... HFE 0.053 hemochromatosis protein isoform 6 precursor LOC100294318 0.048 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.048 PREDICTED: similar to major histocompatibility comp... HLA-B 0.048 major histocompatibility complex, class I, B precurs... HFE 0.048 hemochromatosis protein isoform 8 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.