HLA-DMB 28832

Name: HLA-DMB	Sequence: fasta or formatted (263aa)		NCBI GI: 4504399
Description: major histocompatibility complex, class II, DM beta precursor		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 15 1 C cysteine 3.0 8 1 D aspartate 3.4 9 2 E glutamate 3.4 9 2 F phenylalanine 3.4 9 1 G glycine 8.0 21 2 H histidine 3.4 9 1 I isoleucine 3.4 9 2 K lysine 3.4 9 1 L leucine 11.8 31 3 M methionine 2.3 6 1 N asparagine 4.6 12 1 P proline 7.2 19 2 Q glutamine 3.4 9 1 R arginine 3.4 9 2 S serine 8.0 21 2 T threonine 9.9 26 2 V valine 6.1 16 2 W tryptophan 3.0 8 1 Y tyrosine 3.0 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 major histocompatibility complex, class II, DM beta p... LOC100294275 0.109 PREDICTED: similar to major histocompatibility comp... LOC100294275 0.109 PREDICTED: similar to major histocompatibility comp... HLA-DPB1 0.107 major histocompatibility complex, class II, DP beta ... LOC100293977 0.105 PREDICTED: similar to major histocompatibility comp... LOC100294276 0.105 PREDICTED: similar to major histocompatibility comp... LOC100294276 0.105 PREDICTED: similar to major histocompatibility comp... LOC100294191 0.105 PREDICTED: similar to major histocompatibility comp... HLA-DRB3 0.103 major histocompatibility complex, class II, DR beta ... LOC100294468 0.103 PREDICTED: similar to HLA class II histocompatibili... LOC100290966 0.102 PREDICTED: hypothetical protein XP_002346811 LOC100294189 0.102 PREDICTED: similar to HLA class II histocompatibili... LOC100294189 0.102 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.102 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.102 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB1 0.100 major histocompatibility complex, class II, DR beta... LOC100133583 0.100 PREDICTED: similar to major histocompatibility comp... LOC100294278 0.100 PREDICTED: similar to major histocompatibility comp... LOC100294115 0.100 PREDICTED: similar to major histocompatibility comp... HLA-DPA1 0.100 major histocompatibility complex, class II, DP alpha... LOC651845 0.098 PREDICTED: similar to MHC class II antigen HLA-DOB 0.098 major histocompatibility complex, class II, DO beta p... HLA-DRB4 0.096 major histocompatibility complex, class II, DR beta ... HLA-DRB4 0.096 PREDICTED: major histocompatibility complex, class ... LOC100133583 0.096 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.096 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.096 PREDICTED: similar to major histocompatibility comp... HLA-DQB1 0.094 major histocompatibility complex, class II, DQ beta... HLA-DRA 0.094 major histocompatibility complex, class II, DR alpha... HLA-F 0.090 major histocompatibility complex, class I, F isofor... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.