HLA-DRB5 9930

Name: HLA-DRB5	Sequence: fasta or formatted (266aa)		NCBI GI: 18641375
Description: major histocompatibility complex, class II, DR beta 5 precursor		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 12 2 C cysteine 1.9 5 1 D aspartate 4.1 11 1 E glutamate 6.8 18 2 F phenylalanine 5.3 14 2 G glycine 8.6 23 2 H histidine 3.0 8 2 I isoleucine 1.5 4 1 K lysine 3.4 9 1 L leucine 10.2 27 2 M methionine 1.9 5 1 N asparagine 3.4 9 1 P proline 4.1 11 1 Q glutamine 5.3 14 2 R arginine 6.8 18 2 S serine 7.1 19 2 T threonine 6.8 18 1 V valine 9.8 26 2 W tryptophan 1.5 4 1 Y tyrosine 4.1 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 major histocompatibility complex, class II, DR beta ... LOC100294468 0.897 PREDICTED: similar to HLA class II histocompatibili... LOC100290966 0.883 PREDICTED: hypothetical protein XP_002346811 HLA-DRB1 0.880 major histocompatibility complex, class II, DR beta... LOC100294189 0.874 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.874 PREDICTED: similar to HLA class II histocompatibili... LOC100294275 0.860 PREDICTED: similar to major histocompatibility comp... LOC100294276 0.859 PREDICTED: similar to major histocompatibility comp... HLA-DRB3 0.851 major histocompatibility complex, class II, DR beta ... HLA-DRB4 0.845 major histocompatibility complex, class II, DR beta ... LOC100294275 0.834 PREDICTED: similar to major histocompatibility comp... LOC100294276 0.830 PREDICTED: similar to major histocompatibility comp... LOC100294189 0.763 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.763 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB4 0.738 PREDICTED: major histocompatibility complex, class ... LOC100294036 0.734 PREDICTED: similar to HLA class II histocompatibili... LOC100133583 0.610 PREDICTED: similar to major histocompatibility comp... LOC100293977 0.608 PREDICTED: similar to major histocompatibility comp... LOC100294278 0.608 PREDICTED: similar to major histocompatibility comp... LOC100294191 0.608 PREDICTED: similar to major histocompatibility comp... LOC100294115 0.608 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.597 PREDICTED: similar to major histocompatibility comp... HLA-DQB1 0.595 major histocompatibility complex, class II, DQ beta... LOC100133811 0.589 PREDICTED: similar to HLA class II histocompatibili... LOC100294318 0.585 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.585 PREDICTED: similar to major histocompatibility comp... HLA-DPB1 0.551 major histocompatibility complex, class II, DP beta ... HLA-DOB 0.501 major histocompatibility complex, class II, DO beta p... LOC651845 0.432 PREDICTED: similar to MHC class II antigen LOC100133661 0.333 PREDICTED: similar to MHC class II antigen Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.