LOC100290966 19750

Name: LOC100290966	Sequence: fasta or formatted (266aa)		NCBI GI: 239748820
Description: PREDICTED: hypothetical protein XP_002346811		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.8 10 2 C cysteine 2.3 6 1 D aspartate 2.6 7 1 E glutamate 7.5 20 2 F phenylalanine 6.0 16 2 G glycine 9.0 24 2 H histidine 3.4 9 2 I isoleucine 1.1 3 1 K lysine 2.6 7 1 L leucine 10.5 28 2 M methionine 1.9 5 1 N asparagine 3.4 9 1 P proline 4.5 12 1 Q glutamine 4.5 12 1 R arginine 7.9 21 2 S serine 7.5 20 2 T threonine 6.4 17 1 V valine 10.5 28 2 W tryptophan 1.5 4 1 Y tyrosine 3.0 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002346811 LOC100294276 0.956 PREDICTED: similar to major histocompatibility comp... LOC100294276 0.925 PREDICTED: similar to major histocompatibility comp... HLA-DRB1 0.918 major histocompatibility complex, class II, DR beta... LOC100294468 0.904 PREDICTED: similar to HLA class II histocompatibili... LOC100294275 0.904 PREDICTED: similar to major histocompatibility comp... LOC100294189 0.895 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.895 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB3 0.891 major histocompatibility complex, class II, DR beta ... HLA-DRB5 0.883 major histocompatibility complex, class II, DR beta ... LOC100294275 0.874 PREDICTED: similar to major histocompatibility comp... HLA-DRB4 0.864 major histocompatibility complex, class II, DR beta ... LOC100294189 0.776 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.776 PREDICTED: similar to HLA class II histocompatibili... LOC100294036 0.761 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB4 0.750 PREDICTED: major histocompatibility complex, class ... LOC100133811 0.616 PREDICTED: similar to HLA class II histocompatibili... LOC100293977 0.612 PREDICTED: similar to major histocompatibility comp... LOC100294191 0.612 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.608 PREDICTED: similar to major histocompatibility comp... LOC100294278 0.606 PREDICTED: similar to major histocompatibility comp... LOC100294115 0.606 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.593 PREDICTED: similar to major histocompatibility comp... HLA-DQB1 0.591 major histocompatibility complex, class II, DQ beta... LOC100294318 0.589 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.587 PREDICTED: similar to major histocompatibility comp... HLA-DPB1 0.560 major histocompatibility complex, class II, DP beta ... HLA-DOB 0.503 major histocompatibility complex, class II, DO beta p... LOC651845 0.440 PREDICTED: similar to MHC class II antigen LOC100133661 0.346 PREDICTED: similar to MHC class II antigen Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.