HLA-DRB1 5751

Name: HLA-DRB1	Sequence: fasta or formatted (266aa)		NCBI GI: 155030211
Description: major histocompatibility complex, class II, DR beta 1 precursor		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 11 2 C cysteine 2.3 6 1 D aspartate 3.0 8 1 E glutamate 6.4 17 2 F phenylalanine 6.0 16 2 G glycine 8.6 23 2 H histidine 2.3 6 2 I isoleucine 1.5 4 1 K lysine 3.0 8 1 L leucine 10.2 27 2 M methionine 2.3 6 1 N asparagine 3.0 8 1 P proline 4.9 13 1 Q glutamine 5.6 15 1 R arginine 6.8 18 2 S serine 8.3 22 2 T threonine 6.8 18 1 V valine 9.8 26 2 W tryptophan 1.9 5 1 Y tyrosine 3.4 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 major histocompatibility complex, class II, DR beta... LOC100290966 0.918 PREDICTED: hypothetical protein XP_002346811 LOC100294276 0.914 PREDICTED: similar to major histocompatibility comp... LOC100294276 0.904 PREDICTED: similar to major histocompatibility comp... LOC100294189 0.899 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.899 PREDICTED: similar to HLA class II histocompatibili... LOC100294468 0.887 PREDICTED: similar to HLA class II histocompatibili... LOC100294275 0.881 PREDICTED: similar to major histocompatibility comp... HLA-DRB5 0.880 major histocompatibility complex, class II, DR beta ... HLA-DRB3 0.878 major histocompatibility complex, class II, DR beta ... HLA-DRB4 0.868 major histocompatibility complex, class II, DR beta ... LOC100294275 0.868 PREDICTED: similar to major histocompatibility comp... LOC100294189 0.780 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.780 PREDICTED: similar to HLA class II histocompatibili... LOC100294036 0.776 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB4 0.755 PREDICTED: major histocompatibility complex, class ... LOC100293977 0.606 PREDICTED: similar to major histocompatibility comp... LOC100294191 0.606 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.602 PREDICTED: similar to major histocompatibility comp... LOC100294278 0.600 PREDICTED: similar to major histocompatibility comp... LOC100294115 0.600 PREDICTED: similar to major histocompatibility comp... LOC100133811 0.598 PREDICTED: similar to HLA class II histocompatibili... LOC100133583 0.597 PREDICTED: similar to major histocompatibility comp... HLA-DQB1 0.589 major histocompatibility complex, class II, DQ beta... LOC100294318 0.583 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.583 PREDICTED: similar to major histocompatibility comp... HLA-DPB1 0.579 major histocompatibility complex, class II, DP beta ... HLA-DOB 0.520 major histocompatibility complex, class II, DO beta p... LOC651845 0.451 PREDICTED: similar to MHC class II antigen LOC100133661 0.344 PREDICTED: similar to MHC class II antigen Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.