Guide to the Human Genome
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Name: LOC100129802 Sequence: fasta or formatted (180aa) NCBI GI: 169205554
Description:

PREDICTED: hypothetical protein, partial

Not currently referenced in the text

Other entries for this name:
alt prot {179aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.1          2           1
 C cysteine           11.1         20           1
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       1.7          3           1
 G glycine             0.0          0           0
 H histidine          12.8         23           1
 I isoleucine         17.8         32           1
 K lysine              0.0          0           0
 L leucine             0.0          0           0
 M methionine          7.2         13           1
 N asparagine          0.0          0           0
 P proline             0.0          0           0
 Q glutamine           0.0          0           0
 R arginine            1.1          2           1
 S serine              0.0          0           0
 T threonine          11.7         21           1
 V valine             12.2         22           1
 W tryptophan          0.0          0           0
 Y tyrosine           23.3         42           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein, partial 
LOC100129802          0.570   PREDICTED: hypothetical protein 
LOC100288317          0.478   PREDICTED: hypothetical protein XP_002342505 
LOC100133226          0.466   PREDICTED: hypothetical protein 
LOC100134411          0.463   PREDICTED: hypothetical protein 
LOC100134730          0.456   PREDICTED: hypothetical protein 
LOC100129642          0.453   PREDICTED: hypothetical protein 
LOC100134139          0.453   PREDICTED: hypothetical protein 
LOC100131203          0.448   PREDICTED: hypothetical protein 
LOC100133173          0.443   PREDICTED: hypothetical protein 
LOC100291751          0.438   PREDICTED: hypothetical protein XP_002345809, parti...
LOC100133741          0.438   PREDICTED: hypothetical protein 
LOC100132782          0.435   PREDICTED: hypothetical protein 
LOC100134332          0.435   PREDICTED: hypothetical protein, partial 
LOC100133553          0.435   PREDICTED: hypothetical protein, partial 
LOC100134060          0.433   PREDICTED: hypothetical protein 
LOC100133450          0.433   PREDICTED: hypothetical protein, partial 
LOC100287975          0.433   PREDICTED: hypothetical protein XP_002342501, parti...
LOC100129825          0.430   PREDICTED: hypothetical protein 
LOC100132423          0.428   PREDICTED: hypothetical protein, partial 
LOC100132016          0.425   PREDICTED: hypothetical protein 
LOC100134279          0.423   PREDICTED: hypothetical protein, partial 
LOC100293155          0.423   PREDICTED: hypothetical protein 
LOC100131203          0.423   PREDICTED: similar to serine/threonine-protein kina...
LOC100131203          0.423   PREDICTED: similar to serine/threonine-protein kina...
LOC100132107          0.420   PREDICTED: hypothetical protein 
LOC100132679          0.413   PREDICTED: hypothetical protein 
LOC100128267          0.413   PREDICTED: hypothetical protein, partial 
LOC100133515          0.410   PREDICTED: hypothetical protein 
LOC100134353          0.408   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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