Guide to the Human Genome
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Name: TIMM23 Sequence: fasta or formatted (209aa) NCBI GI: 5454122
Description:

translocase of inner mitochondrial membrane 23 (yeast) homolog

Referenced in:

Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         20           2
 C cysteine            1.4          3           2
 D aspartate           2.9          6           2
 E glutamate           3.3          7           1
 F phenylalanine       3.8          8           2
 G glycine            16.7         35           4
 H histidine           1.0          2           1
 I isoleucine          2.9          6           2
 K lysine              3.3          7           1
 L leucine            13.4         28           2
 M methionine          4.3          9           1
 N asparagine          5.7         12           2
 P proline             2.9          6           1
 Q glutamine           2.9          6           2
 R arginine            4.3          9           1
 S serine              4.3          9           1
 T threonine           9.1         19           2
 V valine              3.3          7           1
 W tryptophan          1.4          3           1
 Y tyrosine            3.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   translocase of inner mitochondrial membrane 23 (yeast... 
LOC100287932          1.000   PREDICTED: hypothetical protein XP_002343027 isofor...
LOC100287932          0.771   PREDICTED: hypothetical protein XP_002343028 isofor...
TIMM23B               0.231   PREDICTED: translocase of inner mitochondrial membr...
TIMM22                0.032   translocase of inner mitochondrial membrane 22 homol...
SIX3                  0.025   sine oculis homeobox homolog 3 
C3orf1                0.025   hypothetical protein LOC51300 
LOR                   0.025   loricrin 
TLX1                  0.025   T-cell leukemia homeobox 1 
PHC1                  0.022   polyhomeotic 1-like 
ONECUT3               0.017   one cut homeobox 3 
GATAD1                0.015   GATA zinc finger domain containing 1 
ARID1B                0.012   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.012   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.012   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
LOC120364             0.012   PREDICTED: similar to heterogeneous nuclear ribonuc...
NFKB1                 0.010   nuclear factor kappa-B, subunit 1 
LOC120364             0.010   PREDICTED: similar to heterogeneous nuclear ribonucl...
LOC120364             0.010   PREDICTED: similar to heterogeneous nuclear ribonucl...
ZFHX3                 0.010   AT-binding transcription factor 1 
GAR1                  0.010   nucleolar protein family A, member 1 
GAR1                  0.010   nucleolar protein family A, member 1 
MYOZ1                 0.010   myozenin 1 
LOC100293487          0.010   PREDICTED: similar to cag 
LOC100291289          0.010   PREDICTED: hypothetical protein XP_002347296 
LOC100287896          0.010   PREDICTED: hypothetical protein XP_002343159 
KRT1                  0.007   keratin 1 
SDK2                  0.007   sidekick 2 
KRT9                  0.007   keratin 9 
SHOX2                 0.007   short stature homeobox 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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