LOC100287896 18004

Name: LOC100287896	Sequence: fasta or formatted (392aa)		NCBI GI: 239744433
Description: PREDICTED: hypothetical protein XP_002343159		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 19 1 C cysteine 1.5 6 1 D aspartate 6.6 26 2 E glutamate 7.4 29 3 F phenylalanine 3.1 12 2 G glycine 4.8 19 1 H histidine 4.1 16 1 I isoleucine 5.4 21 1 K lysine 12.8 50 3 L leucine 9.7 38 2 M methionine 3.8 15 1 N asparagine 5.4 21 2 P proline 2.3 9 1 Q glutamine 4.3 17 3 R arginine 3.6 14 2 S serine 7.7 30 3 T threonine 5.1 20 2 V valine 4.6 18 2 W tryptophan 0.8 3 1 Y tyrosine 2.3 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002343159 LOC100291289 1.000 PREDICTED: hypothetical protein XP_002347296 LOC100293487 0.997 PREDICTED: similar to cag JRK 0.153 jerky isoform a JRK 0.153 jerky isoform b TIGD2 0.130 tigger transposable element derived 2 JRKL 0.118 jerky homolog-like TIGD7 0.085 tigger transposable element derived 7 TIGD4 0.060 tigger transposable element derived 4 TIGD6 0.054 hypothetical protein LOC81789 TIGD1 0.048 hypothetical protein LOC200765 TIGD5 0.042 tigger transposable element derived 5 MGC16385 0.037 hypothetical protein LOC92806 TIGD3 0.033 tigger transposable element derived 3 CENPB 0.031 centromere protein B LOC100293326 0.012 PREDICTED: similar to hCG1802057 LOC100291015 0.012 PREDICTED: hypothetical protein XP_002347719 LOC100288326 0.012 PREDICTED: hypothetical protein XP_002344143 KIF15 0.012 kinesin family member 15 DCHS2 0.012 dachsous 2 isoform 1 ATRX 0.010 transcriptional regulator ATRX isoform 1 LOC440577 0.009 PREDICTED: similar to nucleophosmin 1 LOC440577 0.009 PREDICTED: similar to nucleophosmin 1 LOC440577 0.009 PREDICTED: similar to nucleophosmin 1 DDX23 0.008 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 NARG1 0.008 NMDA receptor regulated 1 ARID4B 0.008 AT rich interactive domain 4B isoform 2 ARID4B 0.008 AT rich interactive domain 4B isoform 1 UGCGL2 0.008 UDP-glucose ceramide glucosyltransferase-like 2 [Ho... MYO18B 0.008 myosin XVIIIB Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.