ARID1B 27319

Name: ARID1B	Sequence: fasta or formatted (2191aa)		NCBI GI: 40068464
Description: AT rich interactive domain 1B (SWI1-like) isoform 2		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt prot [2178aa] AT rich interactive domain 1B (SWI1-like) isoform 3 alt prot [2231aa] AT rich interactive domain 1B (SWI1-like) isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 179 11 C cysteine 0.9 19 1 D aspartate 4.0 88 3 E glutamate 4.6 100 3 F phenylalanine 1.9 41 1 G glycine 11.3 248 13 H histidine 2.8 62 6 I isoleucine 2.6 58 2 K lysine 3.7 80 2 L leucine 6.0 132 2 M methionine 4.5 98 3 N asparagine 3.4 75 3 P proline 11.8 258 5 Q glutamine 9.2 201 18 R arginine 3.7 82 3 S serine 11.0 242 4 T threonine 3.3 73 3 V valine 3.2 71 2 W tryptophan 0.7 15 3 Y tyrosine 3.1 69 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1B 0.991 AT rich interactive domain 1B (SWI1-like) isoform 3 ... ARID1B 0.986 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID1A 0.456 AT rich interactive domain 1A isoform a ARID1A 0.400 AT rich interactive domain 1A isoform b COL2A1 0.020 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL3A1 0.020 collagen type III alpha 1 preproprotein COL2A1 0.020 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL1A1 0.020 alpha 1 type I collagen preproprotein COL1A2 0.020 alpha 2 type I collagen ARID3B 0.018 AT rich interactive domain 3B ARID3A 0.018 AT rich interactive domain 3A (BRIGHT- like) protein ... HRNR 0.017 hornerin ARID3C 0.017 AT rich interactive domain 3C (BRIGHT- like) LOR 0.016 loricrin ATN1 0.016 atrophin-1 ATN1 0.016 atrophin-1 COL16A1 0.016 alpha 1 type XVI collagen precursor COL22A1 0.016 collagen, type XXII, alpha 1 COL5A2 0.016 alpha 2 type V collagen preproprotein MN1 0.015 meningioma 1 COL4A5 0.015 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.015 type IV collagen alpha 5 isoform 3 precursor NACA 0.015 nascent polypeptide-associated complex alpha subuni... FLG2 0.015 filaggrin family member 2 FUS 0.015 fusion (involved in t(12;16) in malignant liposarcoma... FLJ22184 0.015 PREDICTED: hypothetical protein FLJ22184 COL5A1 0.015 alpha 1 type V collagen preproprotein COL4A4 0.014 alpha 4 type IV collagen precursor COL4A3 0.014 alpha 3 type IV collagen isoform 4 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.