| Name: LOR | Sequence: fasta or formatted (312aa) | NCBI GI: 109255251 | |
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Description: loricrin
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Referenced in: Protein Composition and Structure
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 1.0 3 1 C cysteine 6.1 19 1 D aspartate 0.3 1 1 E glutamate 0.0 0 0 F phenylalanine 2.9 9 2 G glycine 46.5 145 8 H histidine 0.3 1 1 I isoleucine 1.6 5 2 K lysine 2.2 7 2 L leucine 0.0 0 0 M methionine 0.3 1 1 N asparagine 0.0 0 0 P proline 2.9 9 2 Q glutamine 4.5 14 2 R arginine 0.0 0 0 S serine 23.1 72 2 T threonine 1.9 6 1 V valine 3.5 11 1 W tryptophan 0.3 1 1 Y tyrosine 2.6 8 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 loricrin KRTAP5-4 0.174 keratin associated protein 5-4 KRT9 0.169 keratin 9 KRT10 0.167 keratin 10 KRTAP5-1 0.154 keratin associated protein 5-1 TAF15 0.146 TBP-associated factor 15 isoform 2 TAF15 0.146 TBP-associated factor 15 isoform 1 HNRNPA3 0.143 heterogeneous nuclear ribonucleoprotein A3 HNRNPA1 0.138 heterogeneous nuclear ribonucleoprotein A1 isoform b... KRT1 0.137 keratin 1 HRNR 0.137 hornerin KRT2 0.126 keratin 2 FAM98B 0.126 family with sequence similarity 98, member B isofor... FLG2 0.124 filaggrin family member 2 TRO 0.124 trophinin isoform 5 DMKN 0.123 dermokine isoform 3 precursor KRTAP5-5 0.118 keratin associated protein 5-5 DMKN 0.118 dermokine isoform 5 precursor DMKN 0.117 dermokine isoform 4 precursor DMKN 0.117 dermokine isoform 2 precursor ARID1B 0.114 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1B 0.114 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID1B 0.114 AT rich interactive domain 1B (SWI1-like) isoform 3 ... HNRNPA0 0.112 heterogeneous nuclear ribonucleoprotein A0 FUS 0.111 fusion (involved in t(12;16) in malignant liposarcoma... KRT3 0.111 keratin 3 IRS4 0.101 insulin receptor substrate 4 HNRNPA2B1 0.101 heterogeneous nuclear ribonucleoprotein A2/B1 isofor... HNRNPA2B1 0.101 heterogeneous nuclear ribonucleoprotein A2/B1 isoform... ILF3 0.100 interleukin enhancer binding factor 3 isoform d [Ho...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
