NFKB1 26469

Name: NFKB1	Sequence: fasta or formatted (969aa)		NCBI GI: 34577122
Description: nuclear factor kappa-B, subunit 1		Referenced in: NF-kappaB Pathway Signalosome
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 74 2 C cysteine 1.1 11 1 D aspartate 7.1 69 2 E glutamate 6.6 64 4 F phenylalanine 3.3 32 1 G glycine 9.3 90 6 H histidine 3.1 30 1 I isoleucine 3.8 37 2 K lysine 6.0 58 3 L leucine 11.4 110 4 M methionine 2.3 22 2 N asparagine 3.6 35 2 P proline 5.2 50 1 Q glutamine 4.2 41 2 R arginine 3.6 35 2 S serine 6.2 60 2 T threonine 6.3 61 2 V valine 6.2 60 2 W tryptophan 0.4 4 1 Y tyrosine 2.7 26 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear factor kappa-B, subunit 1 NFKB2 0.330 nuclear factor of kappa light polypeptide gene enha... NFKB2 0.329 nuclear factor of kappa light polypeptide gene enha... NFKB2 0.329 nuclear factor of kappa light polypeptide gene enha... REL 0.118 v-rel reticuloendotheliosis viral oncogene homolog [H... RELA 0.109 v-rel reticuloendotheliosis viral oncogene homolog ... RELA 0.108 v-rel reticuloendotheliosis viral oncogene homolog ... RELB 0.104 reticuloendotheliosis viral oncogene homolog B [Homo... NFKBIA 0.059 nuclear factor of kappa light polypeptide gene enhan... NFKBIE 0.058 nuclear factor of kappa light polypeptide gene enhan... BCL3 0.054 B-cell CLL/lymphoma 3 NFKBIB 0.039 nuclear factor of kappa light polypeptide gene enhan... ANKRD44 0.039 ankyrin repeat domain 44 NFKBIZ 0.036 nuclear factor of kappa light polypeptide gene enhan... NFKBIZ 0.036 nuclear factor of kappa light polypeptide gene enhan... ANK3 0.036 ankyrin 3 isoform 1 MIB1 0.035 mindbomb homolog 1 ANKRD52 0.034 ankyrin repeat domain 52 ANK2 0.034 ankyrin 2 isoform 3 ANK2 0.034 ankyrin 2 isoform 2 ANK2 0.034 ankyrin 2 isoform 1 ANKRD28 0.034 ankyrin repeat domain 28 NFKBID 0.033 nuclear factor of kappa light polypeptide gene enhan... ANK1 0.033 ankyrin 1 isoform 9 ANK1 0.033 ankyrin 1 isoform 1 ANK1 0.033 ankyrin 1 isoform 3 ANK1 0.033 ankyrin 1 isoform 2 ANK1 0.033 ankyrin 1 isoform 4 ANKDD1A 0.032 ankyrin repeat and death domain containing 1A ANKRD50 0.032 ankyrin repeat domain 50 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.