LOC100293487 22475

Name: LOC100293487	Sequence: fasta or formatted (392aa)		NCBI GI: 239755627
Description: PREDICTED: similar to cag		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 19 1 C cysteine 1.5 6 1 D aspartate 6.6 26 2 E glutamate 7.4 29 3 F phenylalanine 3.1 12 2 G glycine 4.8 19 1 H histidine 4.1 16 1 I isoleucine 5.4 21 1 K lysine 12.5 49 3 L leucine 9.7 38 2 M methionine 3.8 15 1 N asparagine 5.6 22 2 P proline 2.3 9 1 Q glutamine 4.3 17 3 R arginine 3.6 14 2 S serine 7.7 30 3 T threonine 5.1 20 2 V valine 4.6 18 2 W tryptophan 0.8 3 1 Y tyrosine 2.3 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to cag LOC100291289 0.996 PREDICTED: hypothetical protein XP_002347296 LOC100287896 0.996 PREDICTED: hypothetical protein XP_002343159 JRK 0.153 jerky isoform a JRK 0.153 jerky isoform b TIGD2 0.129 tigger transposable element derived 2 JRKL 0.120 jerky homolog-like TIGD7 0.082 tigger transposable element derived 7 TIGD4 0.060 tigger transposable element derived 4 TIGD6 0.054 hypothetical protein LOC81789 TIGD1 0.048 hypothetical protein LOC200765 TIGD5 0.042 tigger transposable element derived 5 MGC16385 0.037 hypothetical protein LOC92806 TIGD3 0.033 tigger transposable element derived 3 CENPB 0.031 centromere protein B DCHS2 0.014 dachsous 2 isoform 1 LOC100293326 0.012 PREDICTED: similar to hCG1802057 LOC100291015 0.012 PREDICTED: hypothetical protein XP_002347719 LOC100288326 0.012 PREDICTED: hypothetical protein XP_002344143 KIF15 0.012 kinesin family member 15 ATRX 0.010 transcriptional regulator ATRX isoform 1 LOC440577 0.009 PREDICTED: similar to nucleophosmin 1 LOC440577 0.009 PREDICTED: similar to nucleophosmin 1 LOC440577 0.009 PREDICTED: similar to nucleophosmin 1 CENPE 0.008 centromere protein E DDX23 0.008 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 NARG1 0.008 NMDA receptor regulated 1 MYO18B 0.008 myosin XVIIIB PCDHB4 0.008 protocadherin beta 4 precursor RSPH10B2 0.007 radial spoke head 10 homolog B2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.