SIX3 31255

Name: SIX3	Sequence: fasta or formatted (332aa)		NCBI GI: 4885597
Description: sine oculis homeobox homolog 3		Referenced in: Homeobox and Related Proteins Stem Cells and Early Development
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 30 4 C cysteine 1.5 5 1 D aspartate 3.3 11 1 E glutamate 6.6 22 2 F phenylalanine 3.6 12 1 G glycine 13.3 44 7 H histidine 3.6 12 2 I isoleucine 2.4 8 1 K lysine 4.2 14 2 L leucine 9.0 30 2 M methionine 1.2 4 1 N asparagine 3.3 11 1 P proline 6.3 21 2 Q glutamine 3.3 11 1 R arginine 7.2 24 2 S serine 9.3 31 2 T threonine 5.7 19 2 V valine 3.6 12 2 W tryptophan 1.5 5 1 Y tyrosine 1.8 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sine oculis homeobox homolog 3 SIX6 0.585 SIX homeobox 6 SIX2 0.400 SIX homeobox 2 SIX1 0.386 SIX homeobox 1 SIX4 0.302 sine oculis homeobox homolog 4 SIX5 0.300 sine oculis homeobox homolog 5 LRCH2 0.065 leucine-rich repeats and calponin homology (CH) dom... SHOX2 0.062 short stature homeobox 2 isoform a ARID1B 0.061 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1B 0.061 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID1B 0.061 AT rich interactive domain 1B (SWI1-like) isoform 3 ... POU4F1 0.056 POU domain, class 4, transcription factor 1 FAM98B 0.055 family with sequence similarity 98, member B isofor... PBX2 0.055 pre-B-cell leukemia homeobox 2 CAPNS1 0.055 calpain, small subunit 1 CAPNS1 0.055 calpain, small subunit 1 HOXB3 0.053 homeobox B3 ZIC2 0.053 zinc finger protein of the cerebellum 2 KRT9 0.053 keratin 9 MAF 0.053 v-maf musculoaponeurotic fibrosarcoma oncogene homol... MAF 0.053 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... YEATS2 0.052 YEATS domain containing 2 RALY 0.052 RNA binding protein (autoantigenic, hnRNP-associated ... RALY 0.052 RNA binding protein (autoantigenic, hnRNP-associated... PBX1 0.052 pre-B-cell leukemia homeobox 1 KRT1 0.050 keratin 1 RFX1 0.050 regulatory factor X1 DACH1 0.050 dachshund homolog 1 isoform b DACH1 0.050 dachshund homolog 1 isoform a DACH1 0.050 dachshund homolog 1 isoform c Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.