Guide to the Human Genome
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Name: UCP3 Sequence: fasta or formatted (275aa) NCBI GI: 13259546
Description:

uncoupling protein 3 isoform UCP3S

Referenced in:

Mitochondria
Solute Carrier Families

Other entries for this name:
alt prot [312aa] uncoupling protein 3 isoform UCP3L
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         26           2
 C cysteine            2.9          8           1
 D aspartate           4.7         13           1
 E glutamate           2.5          7           2
 F phenylalanine       4.0         11           1
 G glycine             8.4         23           1
 H histidine           1.1          3           1
 I isoleucine          4.0         11           1
 K lysine              4.7         13           1
 L leucine             8.0         22           2
 M methionine          3.6         10           1
 N asparagine          2.9          8           1
 P proline             5.8         16           2
 Q glutamine           4.4         12           1
 R arginine            5.5         15           1
 S serine              5.5         15           2
 T threonine           8.4         23           2
 V valine              9.8         27           2
 W tryptophan          0.4          1           1
 Y tyrosine            4.0         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   uncoupling protein 3 isoform UCP3S 
UCP3                  1.000   uncoupling protein 3 isoform UCP3L 
UCP2                  0.683   uncoupling protein 2 
UCP1                  0.538   uncoupling protein 1 
SLC25A30              0.253   solute carrier family 25, member 30 
SLC25A14              0.251   solute carrier family 25, member 14 isoform UCP5L [Ho...
SLC25A14              0.251   solute carrier family 25, member 14 isoform UCP5S [H...
SLC25A27              0.245   solute carrier family 25, member 27 
SLC25A10              0.226   solute carrier family 25 (mitochondrial carrier; dic...
SLC25A11              0.217   solute carrier family 25 (mitochondrial carrier; oxo...
SLC25A34              0.153   solute carrier family 25, member 34 
SLC25A35              0.128   solute carrier family 25, member 35 
SLC25A6               0.125   solute carrier family 25, member A6 
C14orf68              0.123   chromosome 14 open reading frame 68 
SLC25A20              0.121   carnitine/acylcarnitine translocase 
SLC25A5               0.117   solute carrier family 25, member 5 
SLC25A45              0.117   solute carrier family 25, member 45 isoform a [Homo...
SLC25A22              0.117   mitochondrial glutamate carrier 1 
SLC25A18              0.117   solute carrier 
SLC25A4               0.111   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A31              0.111   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A1               0.111   solute carrier family 25 (mitochondrial carrier; cit...
SLC25A13              0.111   solute carrier family 25, member 13 isoform 2 
SLC25A13              0.111   solute carrier family 25, member 13 isoform 1 [Homo...
SLC25A19              0.108   solute carrier family 25, member 19 
SLC25A19              0.108   solute carrier family 25, member 19 
SLC25A19              0.108   solute carrier family 25, member 19 
SLC25A29              0.104   solute carrier family 25, member 29 
SLC25A12              0.102   solute carrier family 25, member 12 
LOC100292202          0.092   PREDICTED: similar to solute carrier family 25, mem...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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