Guide to the Human Genome
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Name: SLC25A6 Sequence: fasta or formatted (298aa) NCBI GI: 156071462
Description:

solute carrier family 25, member A6

Referenced in:

Liver
Mitochondria
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         32           3
 C cysteine            1.3          4           1
 D aspartate           5.4         16           1
 E glutamate           2.3          7           1
 F phenylalanine       6.4         19           2
 G glycine            10.4         31           2
 H histidine           1.0          3           1
 I isoleucine          6.7         20           3
 K lysine              7.4         22           2
 L leucine             6.7         20           3
 M methionine          2.7          8           3
 N asparagine          2.0          6           1
 P proline             2.3          7           1
 Q glutamine           4.4         13           1
 R arginine            6.0         18           3
 S serine              4.7         14           1
 T threonine           5.0         15           1
 V valine              8.7         26           2
 W tryptophan          1.7          5           1
 Y tyrosine            4.0         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 25, member A6 
SLC25A5               0.942   solute carrier family 25, member 5 
SLC25A4               0.911   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A31              0.714   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A24              0.195   solute carrier family 25 member 24 isoform 1 
SLC25A24              0.195   solute carrier family 25 member 24 isoform 2 
SLC25A23              0.164   solute carrier family 25, member 23 
LOC100292202          0.157   PREDICTED: similar to solute carrier family 25, mem...
LOC100292202          0.157   PREDICTED: similar to solute carrier family 25, mem...
SLC25A25              0.157   solute carrier family 25, member 25 isoform c 
SLC25A25              0.157   solute carrier family 25, member 25 isoform a 
SLC25A25              0.157   solute carrier family 25, member 25 isoform d 
SLC25A25              0.157   solute carrier family 25, member 25 isoform b 
SLC25A42              0.155   solute carrier family 25, member 42 
SLC25A12              0.148   solute carrier family 25, member 12 
SLC25A16              0.148   solute carrier family 25, member 16 
SLC25A13              0.143   solute carrier family 25, member 13 isoform 2 
SLC25A13              0.143   solute carrier family 25, member 13 isoform 1 [Homo...
SLC25A41              0.141   solute carrier family 25, member 41 
SLC25A14              0.141   solute carrier family 25, member 14 isoform UCP5L [Ho...
SLC25A14              0.141   solute carrier family 25, member 14 isoform UCP5S [H...
SLC25A30              0.140   solute carrier family 25, member 30 
SLC25A43              0.138   mitochondrial solute carrier protein 
UCP3                  0.129   uncoupling protein 3 isoform UCP3L 
SLC25A32              0.127   solute carrier family 25, member 32 
SLC25A18              0.124   solute carrier 
UCP2                  0.122   uncoupling protein 2 
SLC25A29              0.119   solute carrier family 25, member 29 
SLC25A27              0.117   solute carrier family 25, member 27 
UCP3                  0.115   uncoupling protein 3 isoform UCP3S 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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