Guide to the Human Genome
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Name: SLC25A12 Sequence: fasta or formatted (678aa) NCBI GI: 21361103
Description:

solute carrier family 25, member 12

Referenced in:

Mitochondria
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         65           2
 C cysteine            1.0          7           1
 D aspartate           4.3         29           1
 E glutamate           5.3         36           2
 F phenylalanine       6.2         42           2
 G glycine             8.3         56           2
 H histidine           1.9         13           3
 I isoleucine          5.8         39           2
 K lysine              5.0         34           2
 L leucine            10.2         69           3
 M methionine          1.5         10           1
 N asparagine          3.7         25           2
 P proline             5.0         34           2
 Q glutamine           4.6         31           2
 R arginine            5.3         36           2
 S serine              5.8         39           2
 T threonine           5.2         35           2
 V valine              7.2         49           2
 W tryptophan          0.6          4           1
 Y tyrosine            3.7         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 25, member 12 
SLC25A13              0.777   solute carrier family 25, member 13 isoform 2 
SLC25A13              0.776   solute carrier family 25, member 13 isoform 1 [Homo...
SLC25A22              0.143   mitochondrial glutamate carrier 1 
SLC25A18              0.134   solute carrier 
SLC25A45              0.076   solute carrier family 25, member 45 isoform a [Homo...
SLC25A31              0.070   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A20              0.070   carnitine/acylcarnitine translocase 
C14orf68              0.069   chromosome 14 open reading frame 68 
SLC25A21              0.068   solute carrier family 25 (mitochondrial oxodicarboxy...
SLC25A29              0.068   solute carrier family 25, member 29 
SLC25A4               0.067   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A6               0.064   solute carrier family 25, member A6 
SLC25A33              0.063   mitochondrial carrier protein MGC4399 
SLC25A5               0.063   solute carrier family 25, member 5 
SLC25A30              0.060   solute carrier family 25, member 30 
SLC25A44              0.060   solute carrier family 25, member 44 isoform 1 
SLC25A45              0.058   solute carrier family 25, member 45 isoform b [Homo...
SLC25A24              0.058   solute carrier family 25 member 24 isoform 1 
SLC25A24              0.058   solute carrier family 25 member 24 isoform 2 
SLC25A36              0.057   solute carrier family 25, member 36 isoform a [Homo...
SLC25A14              0.057   solute carrier family 25, member 14 isoform UCP5L [Ho...
SLC25A14              0.057   solute carrier family 25, member 14 isoform UCP5S [H...
SLC25A26              0.057   solute carrier family 25, member 26 
SLC25A11              0.057   solute carrier family 25 (mitochondrial carrier; oxo...
SLC25A1               0.057   solute carrier family 25 (mitochondrial carrier; cit...
SLC25A37              0.056   solute carrier family 25, member 37 
SLC25A2               0.054   solute carrier family 25 member 2 
SLC25A36              0.054   solute carrier family 25, member 36 isoform b [Homo...
SLC25A23              0.054   solute carrier family 25, member 23 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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