Guide to the Human Genome
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Name: SLC25A22 Sequence: fasta or formatted (323aa) NCBI GI: 13375983
Description:

mitochondrial glutamate carrier 1

Referenced in:

Glutamate
Mitochondria
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.4         40           3
 C cysteine            2.5          8           1
 D aspartate           3.7         12           1
 E glutamate           3.1         10           2
 F phenylalanine       3.7         12           2
 G glycine             9.3         30           2
 H histidine           0.6          2           1
 I isoleucine          5.3         17           1
 K lysine              5.0         16           1
 L leucine            12.7         41           2
 M methionine          1.9          6           1
 N asparagine          2.8          9           1
 P proline             5.0         16           1
 Q glutamine           6.8         22           2
 R arginine            5.6         18           1
 S serine              5.3         17           1
 T threonine           5.0         16           2
 V valine              6.8         22           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.8          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial glutamate carrier 1 
SLC25A18              0.621   solute carrier 
SLC25A12              0.311   solute carrier family 25, member 12 
SLC25A13              0.310   solute carrier family 25, member 13 isoform 2 
SLC25A13              0.310   solute carrier family 25, member 13 isoform 1 [Homo...
C14orf68              0.153   chromosome 14 open reading frame 68 
SLC25A1               0.147   solute carrier family 25 (mitochondrial carrier; cit...
SLC25A31              0.138   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A45              0.132   solute carrier family 25, member 45 isoform a [Homo...
SLC25A21              0.132   solute carrier family 25 (mitochondrial oxodicarboxy...
SLC25A20              0.112   carnitine/acylcarnitine translocase 
SLC25A5               0.110   solute carrier family 25, member 5 
SLC25A6               0.109   solute carrier family 25, member A6 
SLC25A26              0.109   solute carrier family 25, member 26 
SLC25A44              0.105   solute carrier family 25, member 44 isoform 1 
SLC25A29              0.105   solute carrier family 25, member 29 
UCP3                  0.102   uncoupling protein 3 isoform UCP3S 
UCP3                  0.102   uncoupling protein 3 isoform UCP3L 
SLC25A14              0.100   solute carrier family 25, member 14 isoform UCP5L [Ho...
SLC25A14              0.100   solute carrier family 25, member 14 isoform UCP5S [H...
SLC25A4               0.099   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A45              0.096   solute carrier family 25, member 45 isoform b [Homo...
SLC25A24              0.096   solute carrier family 25 member 24 isoform 1 
SLC25A24              0.096   solute carrier family 25 member 24 isoform 2 
LOC100292202          0.094   PREDICTED: similar to solute carrier family 25, mem...
LOC100292202          0.094   PREDICTED: similar to solute carrier family 25, mem...
SLC25A25              0.094   solute carrier family 25, member 25 isoform c 
SLC25A25              0.094   solute carrier family 25, member 25 isoform a 
SLC25A25              0.094   solute carrier family 25, member 25 isoform d 
SLC25A25              0.094   solute carrier family 25, member 25 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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