Guide to the Human Genome
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Name: UCP3 Sequence: fasta or formatted (312aa) NCBI GI: 4507807
Description:

uncoupling protein 3 isoform UCP3L

Referenced in:

Mitochondria
Solute Carrier Families

Other entries for this name:
alt prot [275aa] uncoupling protein 3 isoform UCP3S
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         27           2
 C cysteine            2.6          8           1
 D aspartate           4.2         13           1
 E glutamate           2.9          9           2
 F phenylalanine       4.8         15           1
 G glycine             7.7         24           1
 H histidine           1.0          3           1
 I isoleucine          3.5         11           1
 K lysine              4.8         15           1
 L leucine             8.7         27           2
 M methionine          4.2         13           1
 N asparagine          2.9          9           1
 P proline             5.8         18           2
 Q glutamine           4.5         14           1
 R arginine            5.8         18           1
 S serine              5.8         18           2
 T threonine           8.0         25           2
 V valine              9.9         31           2
 W tryptophan          0.6          2           1
 Y tyrosine            3.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   uncoupling protein 3 isoform UCP3L 
UCP3                  0.879   uncoupling protein 3 isoform UCP3S 
UCP2                  0.697   uncoupling protein 2 
UCP1                  0.544   uncoupling protein 1 
SLC25A14              0.284   solute carrier family 25, member 14 isoform UCP5L [Ho...
SLC25A14              0.284   solute carrier family 25, member 14 isoform UCP5S [H...
SLC25A30              0.284   solute carrier family 25, member 30 
SLC25A27              0.259   solute carrier family 25, member 27 
SLC25A11              0.229   solute carrier family 25 (mitochondrial carrier; oxo...
SLC25A10              0.224   solute carrier family 25 (mitochondrial carrier; dic...
SLC25A34              0.161   solute carrier family 25, member 34 
C14orf68              0.124   chromosome 14 open reading frame 68 
SLC25A45              0.123   solute carrier family 25, member 45 isoform a [Homo...
SLC25A6               0.123   solute carrier family 25, member A6 
SLC25A20              0.118   carnitine/acylcarnitine translocase 
SLC25A1               0.116   solute carrier family 25 (mitochondrial carrier; cit...
SLC25A5               0.114   solute carrier family 25, member 5 
SLC25A35              0.113   solute carrier family 25, member 35 
SLC25A4               0.109   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A31              0.109   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A19              0.106   solute carrier family 25, member 19 
SLC25A19              0.106   solute carrier family 25, member 19 
SLC25A19              0.106   solute carrier family 25, member 19 
SLC25A22              0.103   mitochondrial glutamate carrier 1 
LOC100292202          0.103   PREDICTED: similar to solute carrier family 25, mem...
LOC100292202          0.103   PREDICTED: similar to solute carrier family 25, mem...
SLC25A25              0.103   solute carrier family 25, member 25 isoform c 
SLC25A25              0.103   solute carrier family 25, member 25 isoform a 
SLC25A25              0.103   solute carrier family 25, member 25 isoform d 
SLC25A18              0.103   solute carrier 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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