B2M 30551

Name: B2M	Sequence: fasta or formatted (119aa)		NCBI GI: 4757826
Description: beta-2-microglobulin precursor		Referenced in: HLA and Related Proteins Iron, Copper, and Arsenic Metabolism
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 6 1 C cysteine 1.7 2 1 D aspartate 5.9 7 1 E glutamate 7.6 9 1 F phenylalanine 4.2 5 1 G glycine 3.4 4 1 H histidine 3.4 4 1 I isoleucine 4.2 5 1 K lysine 6.7 8 1 L leucine 10.9 13 2 M methionine 1.7 2 1 N asparagine 4.2 5 1 P proline 4.2 5 1 Q glutamine 2.5 3 1 R arginine 5.0 6 1 S serine 10.9 13 1 T threonine 4.2 5 1 V valine 7.6 9 1 W tryptophan 1.7 2 1 Y tyrosine 5.0 6 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 beta-2-microglobulin precursor HLA-DPA1 0.192 major histocompatibility complex, class II, DP alpha... HLA-DPB1 0.169 major histocompatibility complex, class II, DP beta ... HLA-DQA1 0.169 major histocompatibility complex, class II, DQ alpha... LOC731682 0.164 PREDICTED: similar to major histocompatibility comp... LOC100290966 0.164 PREDICTED: hypothetical protein XP_002346811 LOC100294276 0.164 PREDICTED: similar to major histocompatibility comp... LOC100294276 0.164 PREDICTED: similar to major histocompatibility comp... LOC100294224 0.164 PREDICTED: similar to MHC class II antigen HLA-DQA2 0.160 major histocompatibility complex, class II, DQ alpha... LOC731682 0.160 PREDICTED: similar to major histocompatibility comp... LOC100294317 0.160 PREDICTED: similar to MHC HLA-DQ alpha LOC100294277 0.160 PREDICTED: similar to major histocompatibility comp... LOC100294190 0.160 PREDICTED: similar to major histocompatibility comp... LOC100294162 0.160 PREDICTED: similar to major histocompatibility comp... LOC100294114 0.160 PREDICTED: similar to major histocompatibility comp... HLA-DRB4 0.155 major histocompatibility complex, class II, DR beta ... HLA-DRB4 0.155 PREDICTED: major histocompatibility complex, class ... LOC100133678 0.155 PREDICTED: similar to major histocompatibility comp... LOC100294275 0.155 PREDICTED: similar to major histocompatibility comp... LOC100294275 0.155 PREDICTED: similar to major histocompatibility comp... HLA-DMB 0.151 major histocompatibility complex, class II, DM beta p... LOC100294036 0.151 PREDICTED: similar to HLA class II histocompatibili... LOC100294468 0.151 PREDICTED: similar to HLA class II histocompatibili... LOC100294189 0.151 PREDICTED: similar to HLA class II histocompatibili... LOC100294189 0.151 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.151 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.151 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB1 0.146 major histocompatibility complex, class II, DR beta... HLA-DRB5 0.146 major histocompatibility complex, class II, DR beta ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.