HLA-DRA 32259

Name: HLA-DRA	Sequence: fasta or formatted (254aa)		NCBI GI: 52426774
Description: major histocompatibility complex, class II, DR alpha precursor		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 16 2 C cysteine 1.2 3 1 D aspartate 4.7 12 1 E glutamate 9.1 23 2 F phenylalanine 7.1 18 2 G glycine 5.9 15 1 H histidine 2.4 6 1 I isoleucine 7.1 18 3 K lysine 4.3 11 2 L leucine 9.1 23 2 M methionine 2.0 5 1 N asparagine 4.3 11 1 P proline 7.1 18 2 Q glutamine 1.6 4 1 R arginine 4.3 11 2 S serine 4.3 11 1 T threonine 6.3 16 2 V valine 9.4 24 2 W tryptophan 2.0 5 1 Y tyrosine 1.6 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 major histocompatibility complex, class II, DR alpha... HLA-DPA1 0.564 major histocompatibility complex, class II, DP alpha... HLA-DOA 0.521 major histocompatibility complex, class II, DO alpha ... HLA-DQA1 0.511 major histocompatibility complex, class II, DQ alpha... LOC100294317 0.507 PREDICTED: similar to MHC HLA-DQ alpha LOC731682 0.507 PREDICTED: similar to major histocompatibility comp... LOC100294224 0.507 PREDICTED: similar to MHC class II antigen LOC731682 0.497 PREDICTED: similar to major histocompatibility comp... LOC100294190 0.497 PREDICTED: similar to major histocompatibility comp... LOC100294162 0.497 PREDICTED: similar to major histocompatibility comp... HLA-DQA2 0.497 major histocompatibility complex, class II, DQ alpha... LOC100294277 0.483 PREDICTED: similar to major histocompatibility comp... LOC100294114 0.483 PREDICTED: similar to major histocompatibility comp... LOC100133678 0.358 PREDICTED: similar to major histocompatibility comp... HLA-DMA 0.139 major histocompatibility complex, class II, DM alpha... LOC100133763 0.137 PREDICTED: similar to major histocompatibility comp... HLA-DMB 0.101 major histocompatibility complex, class II, DM beta p... LOC100294318 0.095 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.095 PREDICTED: similar to major histocompatibility comp... LOC100293977 0.095 PREDICTED: similar to major histocompatibility comp... LOC100294191 0.095 PREDICTED: similar to major histocompatibility comp... LOC100290966 0.093 PREDICTED: hypothetical protein XP_002346811 LOC100294276 0.093 PREDICTED: similar to major histocompatibility comp... LOC100294276 0.093 PREDICTED: similar to major histocompatibility comp... HLA-DPB1 0.093 major histocompatibility complex, class II, DP beta ... HLA-DRB4 0.091 major histocompatibility complex, class II, DR beta ... HLA-DRB4 0.091 PREDICTED: major histocompatibility complex, class ... LOC100133583 0.089 PREDICTED: similar to major histocompatibility comp... LOC100294468 0.089 PREDICTED: similar to HLA class II histocompatibili... LOC100294275 0.089 PREDICTED: similar to major histocompatibility comp... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.