Guide to the Human Genome
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Name: NOXO1 Sequence: fasta or formatted (376aa) NCBI GI: 41281828
Description:

NADPH oxidase organizer 1 isoform c

Referenced in:

Superoxide Pathway

Other entries for this name:
alt prot [370aa] NADPH oxidase organizer 1 isoform a
alt prot [371aa] NADPH oxidase organizer 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         36           2
 C cysteine            1.9          7           2
 D aspartate           4.3         16           2
 E glutamate           6.1         23           2
 F phenylalanine       3.5         13           2
 G glycine             8.8         33           2
 H histidine           0.8          3           1
 I isoleucine          1.3          5           1
 K lysine              1.3          5           2
 L leucine            11.7         44           2
 M methionine          0.3          1           1
 N asparagine          0.3          1           1
 P proline            10.1         38           3
 Q glutamine           5.6         21           1
 R arginine           12.2         46           2
 S serine              8.0         30           2
 T threonine           5.9         22           2
 V valine              5.3         20           1
 W tryptophan          1.9          7           2
 Y tyrosine            1.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NADPH oxidase organizer 1 isoform c 
NOXO1                 0.980   NADPH oxidase organizer 1 isoform b 
NOXO1                 0.972   NADPH oxidase organizer 1 isoform a 
NCF1                  0.110   neutrophil cytosolic factor 1 
SH3PXD2A              0.093   SH3 multiple domains 1 
SH3PXD2B              0.080   SH3 and PX domains 2B 
ITSN1                 0.032   intersectin 1 isoform ITSN-s 
ITSN1                 0.032   intersectin 1 isoform ITSN-l 
ITSN2                 0.031   intersectin 2 isoform 3 
ITSN2                 0.031   intersectin 2 isoform 1 
ITSN2                 0.031   intersectin 2 isoform 2 
NCK2                  0.027   NCK adaptor protein 2 isoform A 
NCK2                  0.027   NCK adaptor protein 2 isoform A 
FCHSD1                0.027   FCH and double SH3 domains 1 
MAP3K11               0.027   mitogen-activated protein kinase kinase kinase 11 [Ho...
NCK1                  0.024   NCK adaptor protein 1 
CRKL                  0.023   v-crk sarcoma virus CT10 oncogene homolog (avian)-lik...
C1orf113              0.023   SH3 domain-containing protein C1orf113 isoform 1 [H...
SH3D19                0.023   SH3 domain containing 19 isoform c 
SH3D19                0.023   SH3 domain containing 19 isoform b 
SH3D19                0.023   SH3 domain containing 19 isoform a 
SYDE1                 0.022   synapse defective 1, Rho GTPase, homolog 1 
MAP3K9                0.020   mitogen-activated protein kinase kinase kinase 9 [Ho...
SPATA13               0.020   spermatogenesis associated 13 
SHANK1                0.020   SH3 and multiple ankyrin repeat domains 1 
STAC2                 0.020   SH3 and cysteine rich domain 2 
FCHSD2                0.019   FCH and double SH3 domains 2 
AMH                   0.019   anti-Mullerian hormone 
KIAA1804              0.019   mixed lineage kinase 4 
SNX26                 0.019   sorting nexin 26 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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