ITSN1 30888

Name: ITSN1	Sequence: fasta or formatted (1721aa)		NCBI GI: 47717123
Description: intersectin 1 isoform ITSN-l		Referenced in: Additional Interaction Domain Families Rho and Rac Non-Receptor Tyrosine Kinase Pathways
Other entries for this name: alt prot [1220aa] intersectin 1 isoform ITSN-s
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 109 2 C cysteine 0.9 15 1 D aspartate 4.3 74 2 E glutamate 9.3 160 3 F phenylalanine 3.1 53 3 G glycine 5.4 93 2 H histidine 1.9 32 1 I isoleucine 4.8 83 2 K lysine 8.1 140 3 L leucine 9.8 168 3 M methionine 2.0 35 1 N asparagine 3.5 61 2 P proline 6.6 113 2 Q glutamine 7.7 133 3 R arginine 5.6 96 2 S serine 6.7 116 3 T threonine 4.9 85 2 V valine 5.6 96 2 W tryptophan 1.7 30 2 Y tyrosine 1.7 29 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 intersectin 1 isoform ITSN-l ITSN1 0.704 intersectin 1 isoform ITSN-s ITSN2 0.568 intersectin 2 isoform 3 ITSN2 0.563 intersectin 2 isoform 1 ITSN2 0.348 intersectin 2 isoform 2 EPS15L1 0.044 epidermal growth factor receptor pathway substrate 1... TCHH 0.031 trichohyalin ARHGEF11 0.028 Rho guanine nucleotide exchange factor (GEF) 11 isof... ARHGEF11 0.028 Rho guanine nucleotide exchange factor (GEF) 11 isofo... ARHGEF3 0.028 Rho guanine nucleotide exchange factor 3 isoform 2 ... ARHGEF3 0.028 Rho guanine nucleotide exchange factor 3 isoform 1 ... ARHGEF3 0.028 Rho guanine nucleotide exchange factor 3 isoform 3 [H... NET1 0.028 neuroepithelial cell transforming gene 1 isoform 1 ... NET1 0.028 neuroepithelial cell transforming gene 1 isoform 2 [... EPS15 0.028 epidermal growth factor receptor pathway substrate 15... ARHGEF12 0.027 Rho guanine nucleotide exchange factor (GEF) 12 [Homo... SH3D19 0.026 SH3 domain containing 19 isoform c SH3D19 0.026 SH3 domain containing 19 isoform b SH3D19 0.026 SH3 domain containing 19 isoform a SGEF 0.026 Src homology 3 domain-containing guanine nucleotide... LOC283685 0.026 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC100286959 0.026 PREDICTED: hypothetical protein XP_002343921 SH3KBP1 0.026 SH3-domain kinase binding protein 1 isoform a LOC727832 0.025 golgi autoantigen, golgin subfamily a-like LOC283685 0.025 PREDICTED: golgi autoantigen, golgin subfamily a-li... CALD1 0.025 caldesmon 1 isoform 1 ARHGEF1 0.025 Rho guanine nucleotide exchange factor 1 isoform 1 [... ARHGEF1 0.025 Rho guanine nucleotide exchange factor 1 isoform 3 [... ARHGEF1 0.025 Rho guanine nucleotide exchange factor 1 isoform 2 [... ARHGEF16 0.024 Rho guanine exchange factor 16 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.