SYDE1 27898

Name: SYDE1	Sequence: fasta or formatted (735aa)		NCBI GI: 42475970
Description: synapse defective 1, Rho GTPase, homolog 1		Referenced in: Rho and Rac
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 68 2 C cysteine 1.6 12 2 D aspartate 5.2 38 2 E glutamate 6.9 51 2 F phenylalanine 2.2 16 1 G glycine 9.0 66 2 H histidine 1.9 14 2 I isoleucine 1.9 14 2 K lysine 2.9 21 2 L leucine 12.1 89 3 M methionine 0.5 4 1 N asparagine 1.2 9 1 P proline 13.6 100 2 Q glutamine 3.3 24 2 R arginine 10.2 75 3 S serine 6.5 48 2 T threonine 3.7 27 2 V valine 5.0 37 2 W tryptophan 0.8 6 1 Y tyrosine 2.2 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synapse defective 1, Rho GTPase, homolog 1 SYDE2 0.282 synapse defective 1, Rho GTPase, homolog 2 BCR 0.065 breakpoint cluster region isoform 1 ABR 0.063 active breakpoint cluster region-related protein i... ABR 0.063 active breakpoint cluster region-related protein is... ABR 0.063 active breakpoint cluster region-related protein is... BCR 0.062 breakpoint cluster region isoform 2 HMHA1 0.053 minor histocompatibility antigen HA-1 CHN1 0.053 chimerin (chimaerin) 1 isoform a CHN1 0.053 chimerin (chimaerin) 1 isoform b ARHGAP12 0.052 Rho GTPase activating protein 12 CHN2 0.051 beta chimerin isoform 2 CHN2 0.051 beta chimerin isoform 1 ARHGAP27 0.051 Rho GTPase activating protein 27 isoform b ARHGAP27 0.051 Rho GTPase activating protein 27 isoform a ARHGAP23 0.050 Rho GTPase activating protein 23 ARHGAP9 0.050 Rho GTPase activating protein 9 isoform 1 ARHGAP9 0.050 Rho GTPase activating protein 9 isoform 3 GMIP 0.050 GEM interacting protein ARHGAP21 0.048 Rho GTPase activating protein 21 ARHGAP15 0.047 ARHGAP15 ARHGAP5 0.045 Rho GTPase activating protein 5 isoform a ARHGAP5 0.045 Rho GTPase activating protein 5 isoform b FLJ32810 0.043 Rho-type GTPase-activating protein FLJ32810 MYO9B 0.043 myosin IXB isoform 2 MYO9B 0.043 myosin IXB isoform 1 GRLF1 0.042 glucocorticoid receptor DNA binding factor 1 MYO9A 0.042 myosin IXA C20orf95 0.042 PREDICTED: chromosome 20 open reading frame 95 [Hom... C20orf95 0.042 PREDICTED: chromosome 20 open reading frame 95 [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.