Guide to the Human Genome
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Name: ITSN2 Sequence: fasta or formatted (1670aa) NCBI GI: 194294523
Description:

intersectin 2 isoform 3

Referenced in:

Additional Interaction Domain Families
Rho and Rac
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [1697aa] intersectin 2 isoform 1
alt prot [1249aa] intersectin 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         96           2
 C cysteine            1.0         16           1
 D aspartate           4.0         66           2
 E glutamate           9.4        157           4
 F phenylalanine       3.4         56           2
 G glycine             5.3         88           2
 H histidine           1.4         24           1
 I isoleucine          4.3         71           2
 K lysine              8.9        149           3
 L leucine            10.7        179           3
 M methionine          2.6         44           2
 N asparagine          4.3         72           2
 P proline             5.3         88           2
 Q glutamine           7.2        121           3
 R arginine            5.0         83           2
 S serine              8.3        138           4
 T threonine           5.1         86           2
 V valine              4.1         68           2
 W tryptophan          1.7         28           2
 Y tyrosine            2.4         40           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   intersectin 2 isoform 3 
ITSN2                 0.996   intersectin 2 isoform 1 
ITSN2                 0.717   intersectin 2 isoform 2 
ITSN1                 0.587   intersectin 1 isoform ITSN-l 
ITSN1                 0.346   intersectin 1 isoform ITSN-s 
EPS15L1               0.038   epidermal growth factor receptor pathway substrate 1...
TCHH                  0.032   trichohyalin 
ARHGEF12              0.031   Rho guanine nucleotide exchange factor (GEF) 12 [Homo...
EPS15                 0.030   epidermal growth factor receptor pathway substrate 15...
SH3D19                0.030   SH3 domain containing 19 isoform c 
SH3D19                0.030   SH3 domain containing 19 isoform b 
SH3D19                0.030   SH3 domain containing 19 isoform a 
ARHGEF11              0.029   Rho guanine nucleotide exchange factor (GEF) 11 isof...
ARHGEF11              0.029   Rho guanine nucleotide exchange factor (GEF) 11 isofo...
CALD1                 0.028   caldesmon 1 isoform 1 
ARHGEF1               0.027   Rho guanine nucleotide exchange factor 1 isoform 1 [...
ARHGEF1               0.027   Rho guanine nucleotide exchange factor 1 isoform 3 [...
ARHGEF1               0.027   Rho guanine nucleotide exchange factor 1 isoform 2 [...
SGEF                  0.026   Src homology 3 domain-containing guanine nucleotide...
SPATA13               0.025   spermatogenesis associated 13 
ARHGEF16              0.025   Rho guanine exchange factor 16 
LOC727832             0.025   golgi autoantigen, golgin subfamily a-like 
LOC283685             0.025   PREDICTED: golgi autoantigen, golgin subfamily a-li...
ARHGEF3               0.025   Rho guanine nucleotide exchange factor 3 isoform 2 ...
ARHGEF3               0.025   Rho guanine nucleotide exchange factor 3 isoform 1 ...
ARHGEF3               0.025   Rho guanine nucleotide exchange factor 3 isoform 3 [H...
LOC283685             0.024   PREDICTED: golgi autoantigen, golgin subfamily a-li...
ARHGEF7               0.024   PAK-interacting exchange factor beta isoform a [Hom...
ARHGEF7               0.024   PAK-interacting exchange factor beta isoform d [Hom...
ARHGEF7               0.024   PAK-interacting exchange factor beta isoform c [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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