Guide to the Human Genome
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Name: NCF1 Sequence: fasta or formatted (390aa) NCBI GI: 115298672
Description:

neutrophil cytosolic factor 1

Referenced in:

Inositol Pathways
Neutrophils, Eosinophils, and Basophils
Superoxide Pathway
TNF and Related Signals
Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         26           2
 C cysteine            1.0          4           1
 D aspartate           5.1         20           2
 E glutamate           7.4         29           3
 F phenylalanine       3.6         14           2
 G glycine             5.4         21           1
 H histidine           2.1          8           1
 I isoleucine          5.1         20           2
 K lysine              6.7         26           2
 L leucine             7.4         29           2
 M methionine          2.1          8           1
 N asparagine          2.3          9           1
 P proline             7.9         31           2
 Q glutamine           5.4         21           2
 R arginine            8.2         32           3
 S serine              7.4         29           2
 T threonine           5.4         21           1
 V valine              5.4         21           2
 W tryptophan          1.8          7           2
 Y tyrosine            3.6         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neutrophil cytosolic factor 1 
SH3PXD2A              0.237   SH3 multiple domains 1 
SH3PXD2B              0.235   SH3 and PX domains 2B 
NOXO1                 0.105   NADPH oxidase organizer 1 isoform c 
NOXO1                 0.105   NADPH oxidase organizer 1 isoform b 
NOXO1                 0.100   NADPH oxidase organizer 1 isoform a 
LOC100289727          0.078   PREDICTED: hypothetical protein XP_002347816 
ITSN2                 0.062   intersectin 2 isoform 3 
ITSN2                 0.062   intersectin 2 isoform 1 
ITSN2                 0.062   intersectin 2 isoform 2 
ITSN1                 0.049   intersectin 1 isoform ITSN-s 
ITSN1                 0.049   intersectin 1 isoform ITSN-l 
NCF4                  0.043   neutrophil cytosolic factor 4 isoform 1 
NCF4                  0.043   neutrophil cytosolic factor 4 isoform 2 
PSTPIP1               0.041   proline-serine-threonine phosphatase interacting pro...
C1orf113              0.039   SH3 domain-containing protein C1orf113 isoform 1 [H...
NOSTRIN               0.038   nitric oxide synthase trafficker isoform 2 
NOSTRIN               0.038   nitric oxide synthase trafficker isoform 1 
CD2AP                 0.034   CD2-associated protein 
SORBS2                0.034   sorbin and SH3 domain containing 2 isoform 8 
SORBS2                0.034   sorbin and SH3 domain containing 2 isoform 7 
SORBS2                0.034   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.034   sorbin and SH3 domain containing 2 isoform 5 
SORBS2                0.034   sorbin and SH3 domain containing 2 isoform 4 
SORBS2                0.034   sorbin and SH3 domain containing 2 isoform 3 
SORBS2                0.034   sorbin and SH3 domain containing 2 isoform 2 
SORBS2                0.034   sorbin and SH3 domain containing 2 isoform 1 
ARHGEF7               0.032   PAK-interacting exchange factor beta isoform a [Hom...
ARHGEF7               0.032   PAK-interacting exchange factor beta isoform d [Hom...
ARHGEF7               0.032   PAK-interacting exchange factor beta isoform c [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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