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Search of human proteins with 27883882
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|27883882 P18SRP protein [Homo sapiens]
(155 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|27883882 P18SRP protein [Homo sapiens] 312 6e-86
gi|168229156 NFKB activating protein [Homo sapiens] 67 5e-12
gi|27734775 hypothetical protein LOC286499 [Homo sapiens] 67 5e-12
gi|239752449 PREDICTED: hypothetical protein [Homo sapiens] 65 2e-11
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 64 4e-11
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 64 5e-11
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 61 3e-10
gi|56090620 NFKB activating protein-like [Homo sapiens] 61 3e-10
gi|239750213 PREDICTED: hypothetical protein [Homo sapiens] 61 4e-10
gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens] 60 8e-10
gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens] 60 8e-10
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 59 1e-09
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 59 1e-09
gi|40068059 CBF1 interacting corepressor [Homo sapiens] 58 4e-09
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 58 4e-09
gi|21361576 zinc finger, CCHC domain containing 17 [Homo sapiens] 57 8e-09
gi|151301228 formin binding protein 3 [Homo sapiens] 56 1e-08
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 55 2e-08
gi|117553580 adaptor-related protein complex 3, delta 1 subunit ... 54 4e-08
gi|22035606 mitogen-activated protein kinase kinase kinase kinas... 54 4e-08
gi|22035602 mitogen-activated protein kinase kinase kinase kinas... 54 4e-08
gi|22035604 mitogen-activated protein kinase kinase kinase kinas... 54 4e-08
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ... 53 9e-08
gi|42718020 retinitis pigmentosa 9 [Homo sapiens] 53 9e-08
gi|4507241 structure specific recognition protein 1 [Homo sapiens] 52 2e-07
gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1 [... 52 2e-07
gi|71143141 cyclic nucleotide gated channel alpha 1 isoform 2 [H... 52 2e-07
gi|221219020 NYD-SP11 protein [Homo sapiens] 52 2e-07
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 52 2e-07
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 52 2e-07
>gi|27883882 P18SRP protein [Homo sapiens]
Length = 155
Score = 312 bits (800), Expect = 6e-86
Identities = 155/155 (100%), Positives = 155/155 (100%)
Query: 1 MAVPGCNKDSVRAGCKKCGYPGHLTFECRNFLRVDPKRDIVLDVSSTSSEDSDEENEELN 60
MAVPGCNKDSVRAGCKKCGYPGHLTFECRNFLRVDPKRDIVLDVSSTSSEDSDEENEELN
Sbjct: 1 MAVPGCNKDSVRAGCKKCGYPGHLTFECRNFLRVDPKRDIVLDVSSTSSEDSDEENEELN 60
Query: 61 KLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKE 120
KLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKE
Sbjct: 61 KLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKE 120
Query: 121 KKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
KKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK
Sbjct: 121 KKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
>gi|168229156 NFKB activating protein [Homo sapiens]
Length = 415
Score = 67.4 bits (163), Expect = 5e-12
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 45 SSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDT 104
S+TS+ S+EE ++ + R E +K+++K K K KK + S S S +E D+
Sbjct: 171 STTSASTSEEEKKK-------KSSRSKERSKKRRKKKSSKRKHKKYSEDSDSDSDSETDS 223
Query: 105 SKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSE 151
S + ++ KK KKKEKK K + K+ KK KK +KE S+ S+
Sbjct: 224 SDEDNKRRAKKAKKKEKKKKHRSKKYKKKRSKKSRKESSDSSSKESQ 270
Score = 50.4 bits (119), Expect = 6e-07
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 20/113 (17%)
Query: 51 DSDE----ENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSK 106
DSDE E+EE K EEEKKK+ S+ K + KK+RK+ +SK
Sbjct: 156 DSDEHTPVEDEEPKKSTTSAS---TSEEEKKKKSSRSKERSKKRRKKK---------SSK 203
Query: 107 QKKQKYQK---KEKKKEKKSKSKKGKHH-KKEKKKRKKEKHSSTPNSSEFSRK 155
+K +KY + + E S + K KK KKK KK+KH S + S+K
Sbjct: 204 RKHKKYSEDSDSDSDSETDSSDEDNKRRAKKAKKKEKKKKHRSKKYKKKRSKK 256
Score = 43.9 bits (102), Expect = 6e-05
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 45 SSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDT 104
S S DSD E + ++ + K+ ++E+KKK +SK+ K + K+ R SS S+ +++
Sbjct: 210 SEDSDSDSDSETDSSDEDNKRRAKKAKKKEKKKKHRSKKYKKKRSKKSRKESSDSSSKES 269
Query: 105 SKQKKQKYQKKEKKKEKKS 123
++ + K K E+ S
Sbjct: 270 QEEFLENPWKDRTKAEEPS 288
>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
Length = 248
Score = 67.4 bits (163), Expect = 5e-12
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 33/133 (24%)
Query: 45 SSTSSEDSDEENEELNKLQALQEKRI--------------NEEEEKKKEKSKEKIK---- 86
SS+SS DS++E ++ K + ++ R ++E KKK+KSK++ +
Sbjct: 113 SSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSKDETEKEKD 172
Query: 87 ---LKKKRKRSY-----------SSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHK 132
L KKRK+SY S S EED +KK++ +++E+ KEK K KK K HK
Sbjct: 173 VRSLSKKRKKSYPDDKPLSSESSSESDYEEDVQAKKKRRCEEREQAKEKVKKKKK-KQHK 231
Query: 133 KEKKKRKKEKHSS 145
K KK+KK+ SS
Sbjct: 232 KHSKKKKKKSGSS 244
Score = 53.5 bits (127), Expect = 7e-08
Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 23/111 (20%)
Query: 45 SSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSS--STEE 102
SS+SS DS + + +E+EEKK+ K + KKK+ RSY SS ST E
Sbjct: 106 SSSSSSDSSSSSSD------------SEDEEKKQGKRR-----KKKKNRSYKSSQSSTHE 148
Query: 103 DTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFS 153
S+ K + +KKK+ K +++K K + KKRKK P SSE S
Sbjct: 149 SESESK----ESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDDKPLSSESS 195
Score = 50.8 bits (120), Expect = 5e-07
Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 16/126 (12%)
Query: 45 SSTSSEDSDEENEELNK-LQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEE- 102
S +E ++ NE K L+ +EK ++ E K++ ++K K KKK RS SSSS+ +
Sbjct: 55 SKALAEFEEKMNENWKKELEKSREKLLSGNESSSKKRERKK-KRKKKSCRSSSSSSSSDS 113
Query: 103 -----DTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKE--------KKKRKKEKHSSTPNS 149
D+ ++K++ ++++KKK + KS + H+ E KKK+ K++ +
Sbjct: 114 SSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSKDETEKEKDV 173
Query: 150 SEFSRK 155
S+K
Sbjct: 174 RSLSKK 179
Score = 49.7 bits (117), Expect = 1e-06
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 24/122 (19%)
Query: 54 EENEELNKLQALQEKRINEEEEKKKEKSKEKI-----------KLKKKRKR--------- 93
E + +K A E+++NE +K+ EKS+EK+ + KKKRK+
Sbjct: 49 ENKKTGSKALAEFEEKMNENWKKELEKSREKLLSGNESSSKKRERKKKRKKKSCRSSSSS 108
Query: 94 -SYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKE---KKKRKKEKHSSTPNS 149
S SSS+ D+ ++K++ ++++KKK + KS + H+ E K+ KK+K S
Sbjct: 109 SSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSKDETE 168
Query: 150 SE 151
E
Sbjct: 169 KE 170
Score = 37.4 bits (85), Expect = 0.005
Identities = 20/70 (28%), Positives = 41/70 (58%)
Query: 84 KIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKH 143
K +L+ K+ S + + EE ++ K++ +K +K ++S K +K+K+K+K +
Sbjct: 45 KKQLENKKTGSKALAEFEEKMNENWKKELEKSREKLLSGNESSSKKRERKKKRKKKSCRS 104
Query: 144 SSTPNSSEFS 153
SS+ +SS+ S
Sbjct: 105 SSSSSSSDSS 114
Score = 34.3 bits (77), Expect = 0.044
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 44 VSSTSSEDSD-EENEELNKLQALQEK-RINEEEEKKKEKSKEKIKLKKKRKRSYSSSS 99
+SS SS +SD EE+ + K + +E+ + E+ +KKK+K +K KKK+K S S
Sbjct: 190 LSSESSSESDYEEDVQAKKKRRCEEREQAKEKVKKKKKKQHKKHSKKKKKKSGSSHKS 247
Score = 33.5 bits (75), Expect = 0.075
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 83 EKIKLKKKRKRSYSSSSTE-EDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKE 141
E++K + + K++ S + E E+ + +K +K ++K K +++KK++KK
Sbjct: 42 EEVKKQLENKKTGSKALAEFEEKMNENWKKELEKSREKLLSGNESSSKKRERKKKRKKKS 101
Query: 142 KHSSTPNSSEFS 153
SS+ +SS S
Sbjct: 102 CRSSSSSSSSDS 113
Score = 30.0 bits (66), Expect = 0.83
Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 32/117 (27%)
Query: 68 KRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQK-YQKKEKKKEKKSKSK 126
+ + ++ E KK SK + ++K ++ E + S++K + KK+E+K K K
Sbjct: 42 EEVKKQLENKKTGSKALAEFEEKMNENWKK---ELEKSREKLLSGNESSSKKRERKKKRK 98
Query: 127 K----------------------------GKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
K GK KK+K + K SST S S++
Sbjct: 99 KKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESESESKE 155
>gi|239752449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 65.1 bits (157), Expect = 2e-11
Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 11/70 (15%)
Query: 73 EEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHK 132
+ E+KKEK KEK K KKK+K+ K+KK+K +KK+KKK+KK + +K K +
Sbjct: 101 QREEKKEKEKEKKKKKKKKKK-----------KKKKKKKKKKKKKKKKKKKRKRKRKRKR 149
Query: 133 KEKKKRKKEK 142
K KKKRKK+K
Sbjct: 150 KRKKKRKKKK 159
Score = 60.5 bits (145), Expect = 6e-10
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 13/83 (15%)
Query: 59 LNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKK 118
L+ L +EK+ E+E+KKK+K K+K K KKK+K K+KK+K +KK++K
Sbjct: 96 LHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKK-------------KKKKKKKKKKKRK 142
Query: 119 KEKKSKSKKGKHHKKEKKKRKKE 141
+++K K K+ K KK+KKK E
Sbjct: 143 RKRKRKRKRKKKRKKKKKKTGNE 165
Score = 50.1 bits (118), Expect = 8e-07
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 11/79 (13%)
Query: 53 DEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKY 112
+E+ E+ + + ++K+ ++++KKK+K K+K K KKKRKR +++K+K
Sbjct: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKR-----------KRKRKRKR 151
Query: 113 QKKEKKKEKKSKSKKGKHH 131
+KK KKK+KK+ ++ K H
Sbjct: 152 KKKRKKKKKKTGNEGAKIH 170
Score = 49.3 bits (116), Expect = 1e-06
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 101 EEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
E++ K+KK+K +KK+KKK+KK K KK K KK++K+++K K + +K
Sbjct: 107 EKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
Score = 48.9 bits (115), Expect = 2e-06
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 11/79 (13%)
Query: 55 ENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQK 114
+ EE + + ++K+ ++++KKK+K K+K K KKK+K+ +++K+K ++
Sbjct: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKK-----------KRKRKRKRKR 149
Query: 115 KEKKKEKKSKSKKGKHHKK 133
K KKK KK K K G K
Sbjct: 150 KRKKKRKKKKKKTGNEGAK 168
Score = 48.9 bits (115), Expect = 2e-06
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 106 KQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
++KK+K ++K+KKK+KK K KK K KK+KKK+KK+K + RK
Sbjct: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRK 152
Score = 48.5 bits (114), Expect = 2e-06
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 102 EDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
E+ +++K+K +KK+KKK+KK K KK K KK+KKK+K+++ + RK
Sbjct: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
Score = 48.1 bits (113), Expect = 3e-06
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 101 EEDTSKQK-KQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
EE K+K K+K +KK+KKK+KK K KK K KK+KKKRK+++ + +K
Sbjct: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
Score = 47.8 bits (112), Expect = 4e-06
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 110 QKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
Q+ +KKEK+KEKK K KK K KK+KKK+KK+K + RK
Sbjct: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRK 146
Score = 47.0 bits (110), Expect = 7e-06
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 106 KQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+++++K ++KEKKK+KK K KK K KK+KKK+KK+K + RK
Sbjct: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRK 150
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 64.3 bits (155), Expect = 4e-11
Identities = 34/104 (32%), Positives = 65/104 (62%), Gaps = 10/104 (9%)
Query: 49 SEDSDEENEELNKLQALQEKRINEEEEKKK----EKSKEKIKLKKKRKRSYSSSSTEEDT 104
+E+++EE E+ K + ++++ E+E+KKK EK KEK + +KKRKR EE+
Sbjct: 16 TEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEER 75
Query: 105 SKQK------KQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEK 142
+++ K++ +K+E ++ KK K ++ K ++EKKK+++ K
Sbjct: 76 EEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRK 119
Score = 61.2 bits (147), Expect = 3e-10
Identities = 34/109 (31%), Positives = 64/109 (58%), Gaps = 9/109 (8%)
Query: 54 EENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQ 113
+E EE + + +E+ E+E K+KEK KEK K K+K+K++ + +E ++KK+K +
Sbjct: 8 KETEETEETEETEEEE--EKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRK 65
Query: 114 KKEKKKEKK-------SKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+K+KK+E++ + +K + K+E ++RKK+K E +K
Sbjct: 66 RKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKK 114
Score = 60.1 bits (144), Expect = 8e-10
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 55 ENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQK 114
+ +E K EKR +EEE+KK K K K KKK + EE+ K++++K +
Sbjct: 38 KEKEKKKKTKETEKRKEKEEEEKKRKRKRK---KKKEEEEREEEEEEEEEEKEEEEKEEG 94
Query: 115 KEKKKEKKSKSKKGKHHKKEKKKRKKEK 142
+ +KK+KK + K+ + KK+K++RK +K
Sbjct: 95 RRRKKKKKRRRKEEEEEKKKKRRRKTKK 122
Score = 57.8 bits (138), Expect = 4e-09
Identities = 32/107 (29%), Positives = 63/107 (58%), Gaps = 18/107 (16%)
Query: 54 EENEELNKLQALQEKRINEEEEKK----KEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKK 109
++ ++ + + +E EEEE+K KEK KEK K K+K+K++ + +E ++KK
Sbjct: 2 KKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKK 61
Query: 110 QKYQKKEKKKE--------------KKSKSKKGKHHKKEKKKRKKEK 142
+K ++K+KK+E ++ + ++G+ KK+KK+R+KE+
Sbjct: 62 RKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEE 108
Score = 53.5 bits (127), Expect = 7e-08
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 82 KEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSK---------KGKHHK 132
K+K K KK+ + + + TEE+ K+ K+K ++KEK+KEK+ K K K + K
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEK 60
Query: 133 KEKKKRKKEKHSSTPNSSE 151
K K+KRKK+K E
Sbjct: 61 KRKRKRKKKKEEEEREEEE 79
Score = 43.9 bits (102), Expect = 6e-05
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 16/91 (17%)
Query: 47 TSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSK 106
T EE E+ K + ++K E EE+++E+ +EK + +K EE +
Sbjct: 49 TEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEK-----------EEGRRR 97
Query: 107 QKKQKYQKKEKKKEKKSKSKKGKHHKKEKKK 137
+KK+K ++KE+++EKK K + +K KKK
Sbjct: 98 KKKKKRRRKEEEEEKKKKRR-----RKTKKK 123
Score = 42.0 bits (97), Expect = 2e-04
Identities = 20/91 (21%), Positives = 52/91 (57%), Gaps = 10/91 (10%)
Query: 37 KRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYS 96
K+ + ++ +E+ + + + +E+ EEEE+++E+ +E+ K + +R++
Sbjct: 42 KKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKK-- 99
Query: 97 SSSTEEDTSKQKKQKYQKKEKKKEKKSKSKK 127
K++++K +++EKKK+++ K+KK
Sbjct: 100 --------KKKRRRKEEEEEKKKKRRRKTKK 122
Score = 38.5 bits (88), Expect = 0.002
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 88 KKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTP 147
KKK+K+ + TEE ++ ++ ++KE K+++K K K +KEK+K+KK K +
Sbjct: 1 KKKKKKKKETEETEET---EETEEEEEKEGKRKEKRKEK-----RKEKEKKKKTKETEKR 52
Query: 148 NSSEFSRK 155
E K
Sbjct: 53 KEKEEEEK 60
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 63.9 bits (154), Expect = 5e-11
Identities = 30/116 (25%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Query: 41 VLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSST 100
++ S S + E+E + + ++++ E+E+K+E+ K++ K +KKR+R
Sbjct: 19 MVSCSHISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERK 78
Query: 101 EEDTSKQKKQKYQKKEKKKEKKSKSKKGKHH-KKEKKKRKKEKHSSTPNSSEFSRK 155
++ KQ+K++ +K+ +K++K+ K ++ K ++E+KK+K+ K N RK
Sbjct: 79 RKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERK 134
Score = 62.4 bits (150), Expect = 2e-10
Identities = 28/106 (26%), Positives = 63/106 (59%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKK 109
E +E E+ K + +E+R ++E+KK+E+ + + +KK+K + ++K+
Sbjct: 76 ERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKR 135
Query: 110 QKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+K +KK+++KE+K + ++GK +K KK++K+E+ + + +K
Sbjct: 136 KKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKK 181
Score = 61.6 bits (148), Expect = 3e-10
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 57 EELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKE 116
E K + + +R N++ ++K K + K K +K+RKR E K+KK+K +++E
Sbjct: 113 ERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRER---KRKKRKKEERE 169
Query: 117 KKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSE 151
KK+E+ K +K + +KE+++RKKE+ E
Sbjct: 170 KKRERNRKERKKERERKERRERKKERKKERRKKKE 204
Score = 60.8 bits (146), Expect = 4e-10
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 53 DEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTE-EDTSKQKKQK 111
+ E + + + +E+R E ++KKEK K + K + +R+R E E +KQ++++
Sbjct: 74 ERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRER 133
Query: 112 YQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+KK +KK+++ + K+ K K ++KRKK K E +RK
Sbjct: 134 KRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRK 177
Score = 59.7 bits (143), Expect = 1e-09
Identities = 25/101 (24%), Positives = 62/101 (61%)
Query: 54 EENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQ 113
+E E NK + ++++ +++++KE+ +EK + K++RKR E ++ +++ +
Sbjct: 121 KERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERK 180
Query: 114 KKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSR 154
K+ ++KE++ + K+ K +++KK+RKK++ + S+ R
Sbjct: 181 KERERKERRERKKERKKERRKKKERKKDRKTDRQTDSQVFR 221
Score = 58.9 bits (141), Expect = 2e-09
Identities = 25/102 (24%), Positives = 60/102 (58%)
Query: 54 EENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQ 113
E +E + + +EK+ E EK++ K K++ K +++++R +++ +++++ Q
Sbjct: 70 ERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQ 129
Query: 114 KKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
++E+K++K+ K K+ K K+EK++ K+E+ E +K
Sbjct: 130 RRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKK 171
Score = 57.0 bits (136), Expect = 6e-09
Identities = 22/97 (22%), Positives = 58/97 (59%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKK 109
++ + EN++ + + + ++ +E+K+EK + K + K+K+++ E K++K
Sbjct: 121 KERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERK 180
Query: 110 QKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSST 146
++ ++KE+++ KK + K+ + K+ KK RK ++ + +
Sbjct: 181 KERERKERRERKKERKKERRKKKERKKDRKTDRQTDS 217
Score = 55.1 bits (131), Expect = 2e-08
Identities = 27/110 (24%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKI----KLKKKRKRSYSSSSTEEDTS 105
++ E + K + + +R E E K+KE+ K++ K ++KRK+ ++
Sbjct: 52 KERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGR 111
Query: 106 KQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+++K+K ++KE+++E K + ++ + +++KK+RK+ K E RK
Sbjct: 112 RERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRK 161
Score = 52.0 bits (123), Expect = 2e-07
Identities = 20/103 (19%), Positives = 57/103 (55%)
Query: 53 DEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKY 112
+++ E + + K+ E +E+++E + + + +KKR++ + + + K+++
Sbjct: 100 EKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERK 159
Query: 113 QKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+KK KK+E++ K ++ + +K++++RK+ + E +K
Sbjct: 160 RKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKK 202
Score = 50.4 bits (119), Expect = 6e-07
Identities = 26/105 (24%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 51 DSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQ 110
++ + E K + +++R + EK++ K + K K +KK +R ++ K++++
Sbjct: 126 ENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERER 185
Query: 111 KYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTP-NSSEFSR 154
K +++ KK+ KK + KK + K K R+ + P S F+R
Sbjct: 186 KERRERKKERKKERRKKKERKKDRKTDRQTDSQVFRPLRESAFNR 230
Score = 49.3 bits (116), Expect = 1e-06
Identities = 20/102 (19%), Positives = 60/102 (58%)
Query: 54 EENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQ 113
+E ++ + Q + +R ++E K++E+ ++ + +K++KR E K++ ++ +
Sbjct: 99 KEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRER 158
Query: 114 KKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
K++K+K+++ + K+ ++ K+ KK+R++++ + R+
Sbjct: 159 KRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERR 200
Score = 48.1 bits (113), Expect = 3e-06
Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 44 VSSTSSEDSDEENEELNKLQA--LQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTE 101
V + SS + + N EL + + + E E+KKE+ + ++KRKR
Sbjct: 2 VKAISSRAAVKLNTELQMVSCSHISKPCTQRESERKKERRE-----REKRKREREKERKR 56
Query: 102 EDTSKQKKQKYQK---KEKKKEKKSKSKKGKHHK-KEKKKRKKEK 142
E K+KK++ ++ KE+++++K + K+ K + KE++KRKKEK
Sbjct: 57 ERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEK 101
Score = 35.0 bits (79), Expect = 0.026
Identities = 15/61 (24%), Positives = 33/61 (54%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKK 109
++ E+ E N+ + +E+ E E+KKE+ KE+ K K+++K + T+ + +
Sbjct: 165 KEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDRKTDRQTDSQVFRPLR 224
Query: 110 Q 110
+
Sbjct: 225 E 225
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 61.2 bits (147), Expect = 3e-10
Identities = 30/97 (30%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 47 TSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSK 106
TS E + E +E K + +E+ +EE +K+ + KE+ K ++K+ E++ +
Sbjct: 126 TSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKE 185
Query: 107 QKKQKYQKKEKKKEKKSKSKK-GKHHKKEKKKRKKEK 142
+KK++ +KE+KKE++ K ++ K +K+K++RKKE+
Sbjct: 186 RKKRERNRKERKKERERKERRERKKERKKKEERKKER 222
Score = 58.9 bits (141), Expect = 2e-09
Identities = 28/106 (26%), Positives = 58/106 (54%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKK 109
E EE E + + + K E+E++KK++ KE+ + K+ K + + K+++
Sbjct: 89 ERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERE 148
Query: 110 QKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+K +++EK++E+K + K+ + EK++ +KEK E +RK
Sbjct: 149 RKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRK 194
Score = 57.8 bits (138), Expect = 4e-09
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Query: 47 TSSEDSDEENEELNKLQALQEKRINEEEEK------KKEKSKEKIKLKKKRKRSYSSSST 100
T E E E K + +EKR E E++ KKEK E+ K +++RK+
Sbjct: 47 TRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKEN 106
Query: 101 EEDTSKQKKQKYQKKEK---KKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+E K+K++K +KKE+ KE K + +K + ++E+K+R+++K RK
Sbjct: 107 KEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERK 164
Score = 56.6 bits (135), Expect = 8e-09
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKK----------EKSKEKIKLKKKRKRSYSSSS 99
E E E K + E++ E E KK+ EK K K K KK+R R+
Sbjct: 72 EREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGK 131
Query: 100 TEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
E ++K+++ +++E+KKE++ K ++ K KK ++K+ EK RK
Sbjct: 132 ERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERK 187
Score = 56.2 bits (134), Expect = 1e-08
Identities = 29/102 (28%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
Query: 54 EENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQ 113
E E+ + +++R +E +++++E+ K K + +K+RKR +E ++KK++ +
Sbjct: 40 EREREIETRKEGKKERESERKKERREREKRKREREKERKRERGK---KEKKGERKKEERE 96
Query: 114 KKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+K++++EK ++K+G+ +K KKK KKE+ ++ E RK
Sbjct: 97 RKKRRREK--ENKEGEEKEKRKKKEKKERGRTSKEGKERERK 136
Score = 55.8 bits (133), Expect = 1e-08
Identities = 26/95 (27%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKKEKS----KEKIKLKKKRKRSYSSSSTEEDTS 105
++ E+ E + + + K++ E+EE++KEK K++ + +K+RK+ E
Sbjct: 151 KEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKK 210
Query: 106 KQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKK 140
++KK++ +KKE++K++++ ++ + K+E+K+RKK
Sbjct: 211 ERKKKEERKKERQKDRQTNWREKERGKRERKERKK 245
Score = 53.5 bits (127), Expect = 7e-08
Identities = 29/119 (24%), Positives = 61/119 (51%), Gaps = 17/119 (14%)
Query: 50 EDSDEENEELNKLQALQEK------RINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEED 103
E ++E EE K + ++K + +E E+K+E+ +E+ K ++++K ++
Sbjct: 103 EKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKE 162
Query: 104 TSK-----------QKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSE 151
K ++K+K +K+ KK+E+ K +K + +KE+++RKKE+ E
Sbjct: 163 RKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKE 221
Score = 53.1 bits (126), Expect = 9e-08
Identities = 28/109 (25%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 54 EENEELNKLQALQEKRINEE-------EEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSK 106
EE E+ K + + R ++E EE+K+E+ KE+ + K++R++ +E +
Sbjct: 110 EEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKE---RERKERKKR 166
Query: 107 QKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
++KQ +K+E++KEK+ K +K + ++++K+++E+ E +K
Sbjct: 167 ERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKK 215
Score = 50.8 bits (120), Expect = 5e-07
Identities = 24/105 (22%), Positives = 58/105 (55%)
Query: 51 DSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQ 110
++ +E ++ + + +E+R E+ ++++EK +++ + KK++K E +++K+
Sbjct: 46 ETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKE 105
Query: 111 KYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+ +EK+K KK + K+ KE K+R++++ E RK
Sbjct: 106 NKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERK 150
Score = 50.4 bits (119), Expect = 6e-07
Identities = 25/80 (31%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 78 KEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHK--KEK 135
+E+ +E I+ +K+ K+ S +E ++K+++ ++KE+K+E+ K KKG+ K +E+
Sbjct: 39 RERERE-IETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERER 97
Query: 136 KKRKKEKHSSTPNSSEFSRK 155
KKR++EK + E +K
Sbjct: 98 KKRRREKENKEGEEKEKRKK 117
Score = 32.3 bits (72), Expect = 0.17
Identities = 14/42 (33%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Query: 101 EEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEK 142
+ + +++++ +KE KKE++S+ KK + ++EK+KR++EK
Sbjct: 35 QSEIREREREIETRKEGKKERESERKK-ERREREKRKREREK 75
>gi|56090620 NFKB activating protein-like [Homo sapiens]
Length = 402
Score = 61.2 bits (147), Expect = 3e-10
Identities = 41/111 (36%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 51 DSDE----ENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRK------RSYSSSST 100
DSDE E+EE Q N EE +KK+ S+ + K K+K K R YS S +
Sbjct: 147 DSDEHTPVEDEEEVTHQKSSSSDSNSEEHRKKKTSRSRNKKKRKNKSSKRKHRKYSDSDS 206
Query: 101 EEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSE 151
++ KK K +KK K KK K KK+ KK KKE S+ SE
Sbjct: 207 NSESDTNSDSDDDKKRVKAKKKKKKKKHKTKKKKNKKTKKESSDSSCKDSE 257
Score = 48.9 bits (115), Expect = 2e-06
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 19/114 (16%)
Query: 61 KLQALQEKRINEEEEKKKEK-----SKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKK 115
+L + + + +EEE +K S + KKK RS + + +SK+K +KY
Sbjct: 145 QLDSDEHTPVEDEEEVTHQKSSSSDSNSEEHRKKKTSRSRNKKKRKNKSSKRKHRKYSDS 204
Query: 116 --------------EKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+KK+ K K KK K HK +KKK KK K S+ +S + S +
Sbjct: 205 DSNSESDTNSDSDDDKKRVKAKKKKKKKKHKTKKKKNKKTKKESSDSSCKDSEE 258
Score = 38.1 bits (87), Expect = 0.003
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 10/67 (14%)
Query: 43 DVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSS--- 99
D S S D++ ++++ +KR+ +++KKK+K K K K KK K+ S SS
Sbjct: 203 DSDSNSESDTNSDSDD-------DKKRVKAKKKKKKKKHKTKKKKNKKTKKESSDSSCKD 255
Query: 100 TEEDTSK 106
+EED S+
Sbjct: 256 SEEDLSE 262
>gi|239750213 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 60.8 bits (146), Expect = 4e-10
Identities = 28/77 (36%), Positives = 53/77 (68%)
Query: 66 QEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKS 125
++K+ ++KKK +K+K K K++ + + +T T +++K+K ++KEK+KEK+ +
Sbjct: 35 KKKKKTTMKKKKKTTTKKKTTTKTKKRTTTTKKTTTTTTKEKEKEKEKEKEKEKEKEKEK 94
Query: 126 KKGKHHKKEKKKRKKEK 142
+K K KK+KKK+KK+K
Sbjct: 95 EKEKKKKKKKKKKKKKK 111
Score = 58.9 bits (141), Expect = 2e-09
Identities = 29/82 (35%), Positives = 53/82 (64%)
Query: 61 KLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKE 120
K + ++K+ + KKK+K+ K K K K+ +++ T+ ++K+K ++KEK+KE
Sbjct: 28 KKKTTKKKKKKKTTMKKKKKTTTKKKTTTKTKKRTTTTKKTTTTTTKEKEKEKEKEKEKE 87
Query: 121 KKSKSKKGKHHKKEKKKRKKEK 142
K+ + +K K KK+KKK+KK+K
Sbjct: 88 KEKEKEKEKEKKKKKKKKKKKK 109
Score = 54.7 bits (130), Expect = 3e-08
Identities = 27/90 (30%), Positives = 50/90 (55%)
Query: 66 QEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKS 125
++K+ ++++KKK K+K K K+K + + T K ++KEK+KEK+ +
Sbjct: 27 RKKKTTKKKKKKKTTMKKKKKTTTKKKTTTKTKKRTTTTKKTTTTTTKEKEKEKEKEKEK 86
Query: 126 KKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+K K +KEK+K+KK+K + + K
Sbjct: 87 EKEKEKEKEKEKKKKKKKKKKKKKKKLNAK 116
Score = 53.5 bits (127), Expect = 7e-08
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 30/111 (27%)
Query: 57 EELNKLQALQEKRINEEEE------------KKKEKSKEKIKLKKK-----------RKR 93
+EL+K A+++ + E+E KKK+K K +K KKK +KR
Sbjct: 2 QELDKGVAMEKVHVITEKESAWKRGRKKKTTKKKKKKKTTMKKKKKTTTKKKTTTKTKKR 61
Query: 94 SYSSSSTEEDTSKQK-------KQKYQKKEKKKEKKSKSKKGKHHKKEKKK 137
+ ++ T T+K+K K+K ++KEK+KEK+ K KK K KK+KKK
Sbjct: 62 TTTTKKTTTTTTKEKEKEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKKK 112
Score = 45.4 bits (106), Expect = 2e-05
Identities = 25/102 (24%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 59 LNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEK- 117
+ K+ + EK + +KK+ +K+K K K K+ +++ ++ T+K KK+ K+
Sbjct: 10 MEKVHVITEKESAWKRGRKKKTTKKKKKKKTTMKKKKKTTTKKKTTTKTKKRTTTTKKTT 69
Query: 118 ----KKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
K+++K K K+ + K+++K+++KEK + +K
Sbjct: 70 TTTTKEKEKEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKK 111
Score = 42.0 bits (97), Expect = 2e-04
Identities = 20/81 (24%), Positives = 41/81 (50%)
Query: 47 TSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSK 106
T+ + ++ K + +K+ + +K+ +K+ K K E++ K
Sbjct: 31 TTKKKKKKKTTMKKKKKTTTKKKTTTKTKKRTTTTKKTTTTTTKEKEKEKEKEKEKEKEK 90
Query: 107 QKKQKYQKKEKKKEKKSKSKK 127
+K+++ +KK+KKK+KK K KK
Sbjct: 91 EKEKEKEKKKKKKKKKKKKKK 111
Score = 37.4 bits (85), Expect = 0.005
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 37 KRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYS 96
KR ++T++ E+ +E K EK +E+EK+KEK K+K K KKK+K+ +
Sbjct: 60 KRTTTTKKTTTTTTKEKEKEKEKEK-----EKEKEKEKEKEKEKKKKKKKKKKKKKKKLN 114
Query: 97 S 97
+
Sbjct: 115 A 115
Score = 33.5 bits (75), Expect = 0.075
Identities = 15/48 (31%), Positives = 32/48 (66%)
Query: 45 SSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRK 92
++T++++ ++E E+ + + +EK +E++KKK+K K+K K K K
Sbjct: 69 TTTTTKEKEKEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKKKLNAK 116
Score = 26.6 bits (57), Expect = 9.2
Identities = 13/51 (25%), Positives = 30/51 (58%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSST 100
++ ++E E+ + + +EK+ ++++KKK+K K K+ S+S +T
Sbjct: 80 KEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKKKLNAKVCGLEIASWSEMTT 130
>gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens]
Length = 237
Score = 60.1 bits (144), Expect = 8e-10
Identities = 48/136 (35%), Positives = 70/136 (51%), Gaps = 34/136 (25%)
Query: 45 SSTSSEDSDEENEELNKLQALQEKRINEEEE--------------KKKEKSK---EKIK- 86
SS+SS DS++E+++ K + ++ R ++ E KKK+KSK EK K
Sbjct: 104 SSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESSMSETESDSKDSLKKKKKSKDGTEKEKD 163
Query: 87 ---LKKKRK----------RSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKK 133
L KKRK S S S E+ +KK+ +++EK EK K KK HKK
Sbjct: 164 IKGLSKKRKMYSEDKPLSSESLSESEYIEEVRAKKKKSSEEREKATEKTKKKKK---HKK 220
Query: 134 EKKKRKKEKHSSTPNS 149
KK+KK+ SS+P+S
Sbjct: 221 HSKKKKKKAASSSPDS 236
Score = 48.5 bits (114), Expect = 2e-06
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 54 EENEELNKLQALQEKRINEEEEKKKEKSKEKI--------------KLKKKRKRSYSSSS 99
E+ ++ +K A E+++NE +K+ EK +EK+ K +KK+ YSSSS
Sbjct: 39 EKKKKGSKALAEFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKKKEKKKSGRYSSSS 98
Query: 100 TEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSS 145
+ S + ++KK+ K+ K KK + HK + + + S
Sbjct: 99 SSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESSMSETESDS 144
Score = 42.7 bits (99), Expect = 1e-04
Identities = 23/70 (32%), Positives = 43/70 (61%)
Query: 84 KIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKH 143
K +L+KK+K S + + EE ++ K++ +K +K S+S K +K+K+K+K ++
Sbjct: 35 KEQLEKKKKGSKALAEFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKKKEKKKSGRY 94
Query: 144 SSTPNSSEFS 153
SS+ +SS S
Sbjct: 95 SSSSSSSSDS 104
Score = 42.4 bits (98), Expect = 2e-04
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 53 DEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKY 112
+E E+L K + K + E EEK E K++++ +++ S S SS+ KK++
Sbjct: 32 EEVKEQLEKKKK-GSKALAEFEEKMNENWKKELEKHREKLLSGSESSS-------KKRQR 83
Query: 113 QKKEKKK------------EKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFS 153
+KKEKKK + S S + K++ KR+K+K + + SSE S
Sbjct: 84 KKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESS 136
Score = 32.7 bits (73), Expect = 0.13
Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 68 KRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKK 127
+ + E+ EKKK+ SK + ++K ++ E ++ + KK+++K K KK
Sbjct: 32 EEVKEQLEKKKKGSKALAEFEEKMNENWKKEL--EKHREKLLSGSESSSKKRQRKKKEKK 89
Query: 128 GKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+ SS+ +S + +K
Sbjct: 90 KSGRYSSSSSSSSDSSSSSSDSEDEDKK 117
Score = 28.9 bits (63), Expect = 1.9
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 39 DIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSS 98
D L S S + EE K + + ++ E+ +KKK+ K KKK+K++ SSS
Sbjct: 177 DKPLSSESLSESEYIEEVRAKKKKSSEEREKATEKTKKKKKHKKHS---KKKKKKAASSS 233
Score = 26.9 bits (58), Expect = 7.0
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 85 IKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKK----KRKK 140
I + + R SS T +D + + +++ +++ EKK K K +EK K++
Sbjct: 4 IAMARSRGPIQSSGPTIQDYLNRPRPTWEEVKEQLEKKKKGSKALAEFEEKMNENWKKEL 63
Query: 141 EKH 143
EKH
Sbjct: 64 EKH 66
>gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens]
Length = 247
Score = 60.1 bits (144), Expect = 8e-10
Identities = 48/136 (35%), Positives = 70/136 (51%), Gaps = 34/136 (25%)
Query: 45 SSTSSEDSDEENEELNKLQALQEKRINEEEE--------------KKKEKSK---EKIK- 86
SS+SS DS++E+++ K + ++ R ++ E KKK+KSK EK K
Sbjct: 114 SSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESSMSETESDSKDSLKKKKKSKDGTEKEKD 173
Query: 87 ---LKKKRK----------RSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKK 133
L KKRK S S S E+ +KK+ +++EK EK K KK HKK
Sbjct: 174 IKGLSKKRKMYSEDKPLSSESLSESEYIEEVRAKKKKSSEEREKATEKTKKKKK---HKK 230
Query: 134 EKKKRKKEKHSSTPNS 149
KK+KK+ SS+P+S
Sbjct: 231 HSKKKKKKAASSSPDS 246
Score = 48.5 bits (114), Expect = 2e-06
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 54 EENEELNKLQALQEKRINEEEEKKKEKSKEKI--------------KLKKKRKRSYSSSS 99
E+ ++ +K A E+++NE +K+ EK +EK+ K +KK+ YSSSS
Sbjct: 49 EKKKKGSKALAEFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKKKEKKKSGRYSSSS 108
Query: 100 TEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSS 145
+ S + ++KK+ K+ K KK + HK + + + S
Sbjct: 109 SSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESSMSETESDS 154
Score = 42.7 bits (99), Expect = 1e-04
Identities = 23/70 (32%), Positives = 43/70 (61%)
Query: 84 KIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKH 143
K +L+KK+K S + + EE ++ K++ +K +K S+S K +K+K+K+K ++
Sbjct: 45 KEQLEKKKKGSKALAEFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKKKEKKKSGRY 104
Query: 144 SSTPNSSEFS 153
SS+ +SS S
Sbjct: 105 SSSSSSSSDS 114
Score = 42.4 bits (98), Expect = 2e-04
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 53 DEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKY 112
+E E+L K + K + E EEK E K++++ +++ S S SS+ KK++
Sbjct: 42 EEVKEQLEKKKK-GSKALAEFEEKMNENWKKELEKHREKLLSGSESSS-------KKRQR 93
Query: 113 QKKEKKK------------EKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFS 153
+KKEKKK + S S + K++ KR+K+K + + SSE S
Sbjct: 94 KKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESS 146
Score = 32.7 bits (73), Expect = 0.13
Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 68 KRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKK 127
+ + E+ EKKK+ SK + ++K ++ E ++ + KK+++K K KK
Sbjct: 42 EEVKEQLEKKKKGSKALAEFEEKMNENWKKEL--EKHREKLLSGSESSSKKRQRKKKEKK 99
Query: 128 GKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+ SS+ +S + +K
Sbjct: 100 KSGRYSSSSSSSSDSSSSSSDSEDEDKK 127
Score = 28.9 bits (63), Expect = 1.9
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 39 DIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSS 98
D L S S + EE K + + ++ E+ +KKK+ K KKK+K++ SSS
Sbjct: 187 DKPLSSESLSESEYIEEVRAKKKKSSEEREKATEKTKKKKKHKKHS---KKKKKKAASSS 243
Score = 26.9 bits (58), Expect = 7.0
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 85 IKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKK----KRKK 140
I + + R SS T +D + + +++ +++ EKK K K +EK K++
Sbjct: 14 IAMARSRGPIQSSGPTIQDYLNRPRPTWEEVKEQLEKKKKGSKALAEFEEKMNENWKKEL 73
Query: 141 EKH 143
EKH
Sbjct: 74 EKH 76
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 59.3 bits (142), Expect = 1e-09
Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 12/121 (9%)
Query: 46 STSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTS 105
S S + + E++ + + ++EK +E E++KE+ KEK + K K + E+D
Sbjct: 371 SHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKE 430
Query: 106 K---QKKQKYQKKEKKKEKKSKSKKGKHHKKEK-----KKRKKEKHSSTP----NSSEFS 153
K ++++K +K++ KEK+ + K K +K++ +KRKK+K S TP N+S S
Sbjct: 431 KDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRS 490
Query: 154 R 154
R
Sbjct: 491 R 491
Score = 53.5 bits (127), Expect = 7e-08
Identities = 29/133 (21%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 38 RDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSS 97
R+ + + +D ++E E + + +E+ N++ +K++EK +EK K K + +
Sbjct: 381 REKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKE 440
Query: 98 SSTEEDTSKQKKQKYQK-----------KEKKKEKKSK--------SKKGKHHKKEKKKR 138
+ D K+K+Q +K +++KK+KKS+ S++ + +E+++R
Sbjct: 441 HEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRR 500
Query: 139 KKEKHSSTPNSSE 151
+ S +P +S+
Sbjct: 501 RSRSSSRSPRTSK 513
Score = 50.8 bits (120), Expect = 5e-07
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Query: 35 DPKRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRK-- 92
D +R+ + + + E E +EK ++E+E++K++SKE + +KK K
Sbjct: 418 DKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKS 477
Query: 93 ----RSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGK---------HHKKEKKKRK 139
RSY++S +S++++++ + + + SK+ K K +KK+KK+ K
Sbjct: 478 RTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREK 537
Query: 140 KEKHSSTPNSSEFS 153
+ H S E S
Sbjct: 538 ERDHISERRERERS 551
Score = 48.9 bits (115), Expect = 2e-06
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 46 STSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTS 105
S S ++ E K ++ R ++ ++K K KE++K K + K E++
Sbjct: 351 SKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKE 410
Query: 106 KQK-----KQKYQKKEKKKEKKSKSKKGKHHKKEK-----KKRKKEKHSSTPNSSEFSRK 155
+ K K++ + +EK KEK + ++ K H+K++ K++ KEK S E K
Sbjct: 411 RGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEK 470
Score = 47.0 bits (110), Expect = 7e-06
Identities = 27/118 (22%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 45 SSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDT 104
SS+ S + ++ ++ ++ R + ++++++ KS K + K + +R S S D
Sbjct: 318 SSSKSHSRRKRSQSKHRSRSHNRSR-SRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDK 376
Query: 105 SKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKK-------RKKEKHSSTPNSSEFSRK 155
K ++K ++KE+ KEK + ++ + ++EK+K R KE+ E R+
Sbjct: 377 RKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDRE 434
Score = 43.1 bits (100), Expect = 9e-05
Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 21/134 (15%)
Query: 35 DPKRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKE----------- 83
D ++D + +D D+E E+ + +EK ++E ++K++K K+
Sbjct: 428 DKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNAS 487
Query: 84 ---KIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEK----K 136
+ +++R+R SSS TSK K +K + +S++KK K +KE+ +
Sbjct: 488 RRSRSSSRERRRRRSRSSSRSPRTSKTIK---RKSSRSPSPRSRNKKDKKREKERDHISE 544
Query: 137 KRKKEKHSSTPNSS 150
+R++E+ +S SS
Sbjct: 545 RRERERSTSMRKSS 558
Score = 41.2 bits (95), Expect = 4e-04
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 67 EKRINEEEEKKKEKSKEKIKLKKKRKRSYS---SSSTEEDTSKQKKQKYQKKEKKKEKKS 123
E++ + KS+ K +RKRS S S S S+QK ++ K KK KS
Sbjct: 302 ERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKS 361
Query: 124 KSKK---GKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+ ++ + H ++K+K +EK E R+
Sbjct: 362 RERRKSRSRSHSRDKRKDTREKIKEKERVKEKDRE 396
Score = 38.9 bits (89), Expect = 0.002
Identities = 21/101 (20%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 66 QEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSK------------QKKQKYQ 113
+++R ++ KK+ KS+E+ +K R RS+S ++ K +K+++ +
Sbjct: 346 KDRRRSKSPHKKRSKSRER---RKSRSRSHSRDKRKDTREKIKEKERVKEKDREKERERE 402
Query: 114 KKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSR 154
K+ +K++++ K+K +++ +++ KEK E +
Sbjct: 403 KEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEK 443
Score = 38.5 bits (88), Expect = 0.002
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Query: 69 RINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKG 128
R +++KK+EK ++ I +++R+RS TS +K + ++K EK S S K
Sbjct: 526 RSRNKKDKKREKERDHISERRERERS---------TSMRKSSNDRDGKEKLEKNSTSLKE 576
Query: 129 KHHKKE 134
K H KE
Sbjct: 577 KEHNKE 582
Score = 35.0 bits (79), Expect = 0.026
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 80 KSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRK 139
K E++ + + +S+ S++ E ++ K ++K + KS+S H ++KR
Sbjct: 273 KELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSH---SRRKRS 329
Query: 140 KEKHSSTPNSSEFSRK 155
+ KH S ++ SR+
Sbjct: 330 QSKHRSRSHNRSRSRQ 345
Score = 34.3 bits (77), Expect = 0.044
Identities = 24/120 (20%), Positives = 50/120 (41%), Gaps = 7/120 (5%)
Query: 32 LRVDPKRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKR 91
L+++ + ++ + + + +E EE+ K + I+ E + KS E R
Sbjct: 251 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNE-------R 303
Query: 92 KRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSE 151
K S S T + K ++K + + +S+S +++ ++R K H S E
Sbjct: 304 KGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE 363
Score = 33.9 bits (76), Expect = 0.058
Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 10/120 (8%)
Query: 44 VSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEE- 102
+S+ +S + NE + ++ K S+ K K R RS++ S + +
Sbjct: 289 ISAAIEPESGKSNERKGGRSRSHTR--SKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQK 346
Query: 103 ----DTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEK---KKRKKEKHSSTPNSSEFSRK 155
S KK+ ++ +K +S S+ + +EK K+R KEK E R+
Sbjct: 347 DRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKERE 406
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 59.3 bits (142), Expect = 1e-09
Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 12/121 (9%)
Query: 46 STSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTS 105
S S + + E++ + + ++EK +E E++KE+ KEK + K K + E+D
Sbjct: 255 SHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKE 314
Query: 106 K---QKKQKYQKKEKKKEKKSKSKKGKHHKKEK-----KKRKKEKHSSTP----NSSEFS 153
K ++++K +K++ KEK+ + K K +K++ +KRKK+K S TP N+S S
Sbjct: 315 KDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRS 374
Query: 154 R 154
R
Sbjct: 375 R 375
Score = 53.5 bits (127), Expect = 7e-08
Identities = 29/133 (21%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 38 RDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSS 97
R+ + + +D ++E E + + +E+ N++ +K++EK +EK K K + +
Sbjct: 265 REKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKE 324
Query: 98 SSTEEDTSKQKKQKYQK-----------KEKKKEKKSK--------SKKGKHHKKEKKKR 138
+ D K+K+Q +K +++KK+KKS+ S++ + +E+++R
Sbjct: 325 HEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRR 384
Query: 139 KKEKHSSTPNSSE 151
+ S +P +S+
Sbjct: 385 RSRSSSRSPRTSK 397
Score = 50.8 bits (120), Expect = 5e-07
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Query: 35 DPKRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRK-- 92
D +R+ + + + E E +EK ++E+E++K++SKE + +KK K
Sbjct: 302 DKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKS 361
Query: 93 ----RSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGK---------HHKKEKKKRK 139
RSY++S +S++++++ + + + SK+ K K +KK+KK+ K
Sbjct: 362 RTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREK 421
Query: 140 KEKHSSTPNSSEFS 153
+ H S E S
Sbjct: 422 ERDHISERRERERS 435
Score = 48.9 bits (115), Expect = 2e-06
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 46 STSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTS 105
S S ++ E K ++ R ++ ++K K KE++K K + K E++
Sbjct: 235 SKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKE 294
Query: 106 KQK-----KQKYQKKEKKKEKKSKSKKGKHHKKEK-----KKRKKEKHSSTPNSSEFSRK 155
+ K K++ + +EK KEK + ++ K H+K++ K++ KEK S E K
Sbjct: 295 RGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEK 354
Score = 47.0 bits (110), Expect = 7e-06
Identities = 27/118 (22%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 45 SSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDT 104
SS+ S + ++ ++ ++ R + ++++++ KS K + K + +R S S D
Sbjct: 202 SSSKSHSRRKRSQSKHRSRSHNRSR-SRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDK 260
Query: 105 SKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKK-------RKKEKHSSTPNSSEFSRK 155
K ++K ++KE+ KEK + ++ + ++EK+K R KE+ E R+
Sbjct: 261 RKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDRE 318
Score = 43.1 bits (100), Expect = 9e-05
Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 21/134 (15%)
Query: 35 DPKRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKE----------- 83
D ++D + +D D+E E+ + +EK ++E ++K++K K+
Sbjct: 312 DKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNAS 371
Query: 84 ---KIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEK----K 136
+ +++R+R SSS TSK K +K + +S++KK K +KE+ +
Sbjct: 372 RRSRSSSRERRRRRSRSSSRSPRTSKTIK---RKSSRSPSPRSRNKKDKKREKERDHISE 428
Query: 137 KRKKEKHSSTPNSS 150
+R++E+ +S SS
Sbjct: 429 RRERERSTSMRKSS 442
Score = 41.2 bits (95), Expect = 4e-04
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 67 EKRINEEEEKKKEKSKEKIKLKKKRKRSYS---SSSTEEDTSKQKKQKYQKKEKKKEKKS 123
E++ + KS+ K +RKRS S S S S+QK ++ K KK KS
Sbjct: 186 ERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKS 245
Query: 124 KSKK---GKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+ ++ + H ++K+K +EK E R+
Sbjct: 246 RERRKSRSRSHSRDKRKDTREKIKEKERVKEKDRE 280
Score = 38.9 bits (89), Expect = 0.002
Identities = 21/101 (20%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 66 QEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSK------------QKKQKYQ 113
+++R ++ KK+ KS+E+ +K R RS+S ++ K +K+++ +
Sbjct: 230 KDRRRSKSPHKKRSKSRER---RKSRSRSHSRDKRKDTREKIKEKERVKEKDREKERERE 286
Query: 114 KKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSR 154
K+ +K++++ K+K +++ +++ KEK E +
Sbjct: 287 KEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEK 327
Score = 38.5 bits (88), Expect = 0.002
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Query: 69 RINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKG 128
R +++KK+EK ++ I +++R+RS TS +K + ++K EK S S K
Sbjct: 410 RSRNKKDKKREKERDHISERRERERS---------TSMRKSSNDRDGKEKLEKNSTSLKE 460
Query: 129 KHHKKE 134
K H KE
Sbjct: 461 KEHNKE 466
Score = 35.0 bits (79), Expect = 0.026
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 80 KSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRK 139
K E++ + + +S+ S++ E ++ K ++K + KS+S H ++KR
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSH---SRRKRS 213
Query: 140 KEKHSSTPNSSEFSRK 155
+ KH S ++ SR+
Sbjct: 214 QSKHRSRSHNRSRSRQ 229
Score = 34.3 bits (77), Expect = 0.044
Identities = 24/120 (20%), Positives = 50/120 (41%), Gaps = 7/120 (5%)
Query: 32 LRVDPKRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKR 91
L+++ + ++ + + + +E EE+ K + I+ E + KS E R
Sbjct: 135 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNE-------R 187
Query: 92 KRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSE 151
K S S T + K ++K + + +S+S +++ ++R K H S E
Sbjct: 188 KGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE 247
Score = 33.9 bits (76), Expect = 0.058
Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 10/120 (8%)
Query: 44 VSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEE- 102
+S+ +S + NE + ++ K S+ K K R RS++ S + +
Sbjct: 173 ISAAIEPESGKSNERKGGRSRSHTR--SKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQK 230
Query: 103 ----DTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEK---KKRKKEKHSSTPNSSEFSRK 155
S KK+ ++ +K +S S+ + +EK K+R KEK E R+
Sbjct: 231 DRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKERE 290
>gi|40068059 CBF1 interacting corepressor [Homo sapiens]
Length = 450
Score = 57.8 bits (138), Expect = 4e-09
Identities = 53/169 (31%), Positives = 78/169 (46%), Gaps = 49/169 (28%)
Query: 29 RNFLRVDPKRDIVLDVSSTSSEDSDEENEELNKLQALQE----KRINEEEEKKKEKSKEK 84
RN DP ++ V S + D E E L L Q+ ++++ E+KKK+K ++K
Sbjct: 188 RNLTANDPSQEYV-----ASEGEEDPEVEFLKSLTTKQKQKLLRKLDRLEKKKKKKDRKK 242
Query: 85 IKLKKKRKR-------------SYSSSSTE--------EDTSKQKKQKYQKKEKKK---- 119
K +K R + S SSSSTE E +K+KK + +K++K K
Sbjct: 243 KKFQKSRSKHKKHKSSSSSSSSSSSSSSTETSESSSESESNNKEKKIQRKKRKKNKCSGH 302
Query: 120 -----EKKSKSKKGK--------HHKKEKKKRKKE--KHSSTPNSSEFS 153
E+K KSKK K HH +EK K K KH S+ S++S
Sbjct: 303 NNSDSEEKDKSKKRKLHEELSSSHHNREKAKEKPRFLKHESSREDSKWS 351
Score = 47.8 bits (112), Expect = 4e-06
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 10/121 (8%)
Query: 45 SSTSSEDSDEENEELNKLQALQEKRI--NEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEE 102
SST + +S E+E NK + +Q K+ N+ S+EK K KK++ SSS
Sbjct: 269 SSTETSESSSESESNNKEKKIQRKKRKKNKCSGHNNSDSEEKDKSKKRKLHEELSSSHHN 328
Query: 103 DTSKQKKQKYQKKEKKKEKKSKS-----KKGKHHKKEKKKR---KKEKHSSTPNSSEFSR 154
++K ++ K E +E S KK + HK +KR +KE S + E SR
Sbjct: 329 REKAKEKPRFLKHESSREDSKWSHSDSDKKSRTHKHSPEKRGSERKEGSSRSHGREERSR 388
Query: 155 K 155
+
Sbjct: 389 R 389
Score = 43.5 bits (101), Expect = 7e-05
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 26/122 (21%)
Query: 45 SSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDT 104
SS+SS S E E + +E E KEK ++ K +KK K S ++S E+
Sbjct: 262 SSSSSSSSSTETSESS----------SESESNNKEKKIQR-KKRKKNKCSGHNNSDSEEK 310
Query: 105 SKQKKQK--------YQKKEKKKEK-------KSKSKKGKHHKKEKKKRKKEKHSSTPNS 149
K KK+K + +EK KEK S+ H KK + KHS
Sbjct: 311 DKSKKRKLHEELSSSHHNREKAKEKPRFLKHESSREDSKWSHSDSDKKSRTHKHSPEKRG 370
Query: 150 SE 151
SE
Sbjct: 371 SE 372
Score = 33.1 bits (74), Expect = 0.098
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 12/121 (9%)
Query: 45 SSTSSEDSDEE-----NEELNKLQALQEKRINEEEEKKKEKSKEKIKL------KKKRKR 93
+++ SE+ D+ +EEL+ +EK + K E S+E K KK R
Sbjct: 303 NNSDSEEKDKSKKRKLHEELSSSHHNREKAKEKPRFLKHESSREDSKWSHSDSDKKSRTH 362
Query: 94 SYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFS 153
+S + + + + ++E+ + +S+S G + ++E +KR + + S
Sbjct: 363 KHSPEKRGSERKEGSSRSHGREERSRRSRSRS-PGSYKQRETRKRAQRNPGEEQSRRNDS 421
Query: 154 R 154
R
Sbjct: 422 R 422
Score = 27.7 bits (60), Expect = 4.1
Identities = 20/95 (21%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 47 TSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSS--STEEDT 104
+S EDS + + +K + + ++KE S +++ +RS S S S ++
Sbjct: 343 SSREDSKWSHSDSDKKSRTHKHSPEKRGSERKEGSSRSHGREERSRRSRSRSPGSYKQRE 402
Query: 105 SKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRK 139
++++ Q+ +E+ + S+S ++ EK R+
Sbjct: 403 TRKRAQRNPGEEQSRRNDSRSHGTDLYRGEKMYRE 437
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 57.8 bits (138), Expect = 4e-09
Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 9/118 (7%)
Query: 37 KRDIVLDVSSTSSEDSDEENEELNKLQALQEKR--INEEEEKKKEKSKEKIK--LKKKRK 92
K V + ED EE E+ K A +E + I +EE+ KKE+ K+++K +KK+ K
Sbjct: 634 KEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEK 693
Query: 93 RSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKE-KHSSTPNS 149
+ +E K+ K K+ KK+EKK K+ K KKE KK K+ K SSTP S
Sbjct: 694 KEPKKEVKKETPPKEVK----KEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLS 747
Score = 48.5 bits (114), Expect = 2e-06
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 48 SSEDSDEENEELNKLQA--LQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTS 105
S E+ E+ + QA ++ K E+ KK+ K K + K ++K K + E+ T
Sbjct: 609 SKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTP 668
Query: 106 KQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTP 147
+K++K +K+E KKE K + K K+EKK+ KKE TP
Sbjct: 669 IKKEEKPKKEEVKKEVKKEIK-----KEEKKEPKKEVKKETP 705
Score = 48.5 bits (114), Expect = 2e-06
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 61 KLQALQEKRINEE-----EEKKKEKSKEKIKLKKKRKRS--YSSSSTEEDTSKQKKQKYQ 113
K +A +EK + +E E+KK+EK K K ++ KK ++ +++ K++ +K
Sbjct: 629 KPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEI 688
Query: 114 KKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
KKE+KKE K + KK K+ KK+ KKE+ + +K
Sbjct: 689 KKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKK 730
Score = 42.0 bits (97), Expect = 2e-04
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 45 SSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDT 104
S + ++S EE E+ K+ +++ E +EK K + IK + K + ++E+
Sbjct: 554 SKSVRKESKEETPEVTKVNHVEKPPKVESKEKVMVKKDKPIKTETKPSVTEKEVPSKEEP 613
Query: 105 SKQKKQKYQK----------KEK--KKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSE 151
S K + +K KEK KKE K K + K K++ KK +K TP E
Sbjct: 614 SPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKE 672
Score = 36.2 bits (82), Expect = 0.012
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
Query: 37 KRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKE-KIKLKKKRKRSY 95
K++ + +E +E+ K +EK+ ++E KK+ KE K ++KK+ K+
Sbjct: 662 KKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEV 721
Query: 96 SSSSTEEDTSKQKKQKYQKKEK---KKEKKSKSKKGKHHKKEKKKRKKEKHSSTP 147
E +K K KK + KK + K K KKE+ +K + P
Sbjct: 722 KKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPKVPKKEESVKKDSVAAGKP 776
Score = 36.2 bits (82), Expect = 0.012
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRK---RSYSSSSTEEDTSK 106
E+ E +E+ K +E + ++E+KKE KE+ + KK+ K + SST +K
Sbjct: 691 EEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAK 750
Query: 107 QKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRK 139
+ K KK+E K KEK K K
Sbjct: 751 KPAALKPKVPKKEESVKKDSVAAGKPKEKGKIK 783
Score = 32.7 bits (73), Expect = 0.13
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 32 LRVDPKRDIVLDVSSTSSEDSDEEN--EELNKLQALQEKRINEEEEKKKEKSKEKIKLKK 89
++ + K++I + ++ +E +E+ K +EK+ ++EE KE KE KL K
Sbjct: 680 VKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEE--KEPKKEIKKLPK 737
Query: 90 KRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKE 141
K+S S+ +E K K KKE+ +K S + K + K KKE
Sbjct: 738 DAKKS-STPLSEAKKPAALKPKVPKKEESVKKDSVAAGKPKEKGKIKVIKKE 788
Score = 32.0 bits (71), Expect = 0.22
Identities = 18/99 (18%), Positives = 48/99 (48%)
Query: 45 SSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDT 104
+ T + EE+ E + + + E+EE K ++ I+ K++ S + E+
Sbjct: 946 AETEEAEEPEEDGEEHVCVSASKHSPTEDEESAKAEADAYIREKRESVASGDDRAEEDMD 1005
Query: 105 SKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKH 143
+K + ++ E++ +++ K++ + + E +K + E +
Sbjct: 1006 EAIEKGEAEQSEEEADEEDKAEDAREEEYEPEKMEAEDY 1044
Score = 31.6 bits (70), Expect = 0.29
Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 16/92 (17%)
Query: 78 KEKSKEKIKLKKKRKRSYSSSSTEEDTSKQK-----------KQKYQK-----KEKKKEK 121
K+ KEK K KK ++ SSS ++ K K K+ K KKKE
Sbjct: 2236 KKDLKEKTKTKKPGTKTKSSSPVKKSDGKSKPLAASPKPAGLKESSDKVSRVASPKKKES 2295
Query: 122 KSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFS 153
K+ K + K R +EK T N++ S
Sbjct: 2296 VEKAAKPTTTPEVKAARGEEKDKETKNAANAS 2327
Score = 27.7 bits (60), Expect = 4.1
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Query: 70 INEEEEKKKEKSKEKIK-----LKKKRKRSYSSSSTEEDTSK---QKKQKYQKKEKKKEK 121
+ + + K++ S+E +K L K R S T E T +K K + KEK K
Sbjct: 530 VKQTKLKQRADSRESLKPAAKPLPSKSVRKESKEETPEVTKVNHVEKPPKVESKEKVMVK 589
Query: 122 KSKSKKG--KHHKKEKKKRKKEKHSSTPNSSEFSRK 155
K K K K EK+ KE+ S P +E + K
Sbjct: 590 KDKPIKTETKPSVTEKEVPSKEEPS--PVKAEVAEK 623
Score = 26.9 bits (58), Expect = 7.0
Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKK 109
ED EE ++ +EK EE E+ +E +E + + + S TE++ S + +
Sbjct: 927 EDEGAGFEESSETGDYEEKAETEEAEEPEEDGEEHVCVSASK-----HSPTEDEESAKAE 981
Query: 110 QKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSE 151
+EK++ S + + E ++ + + S E
Sbjct: 982 ADAYIREKRESVASGDDRAEEDMDEAIEKGEAEQSEEEADEE 1023
Score = 26.6 bits (57), Expect = 9.2
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 37 KRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSY 95
KR+ V + ED D E + K +A Q + +EE+K ++ +E+ + +K Y
Sbjct: 989 KRESVASGDDRAEEDMD---EAIEKGEAEQSEEEADEEDKAEDAREEEYEPEKMEAEDY 1044
>gi|21361576 zinc finger, CCHC domain containing 17 [Homo sapiens]
Length = 241
Score = 56.6 bits (135), Expect = 8e-09
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 15 CKKCGYPGHLTFECRNFLRVDPKRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEE 74
CKKCG GH +C F++ + ++ D +EE EE + ++
Sbjct: 133 CKKCGCKGHFAKDC--FMQPGGTKYSLIP-------DEEEEKEEAKSAE-FEKPDPTRNP 182
Query: 75 EKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKE 134
+K++K K+K K + ++ SS +E DT K+ ++ K+ K KK K KK KH KK
Sbjct: 183 SRKRKKEKKKKKHRDRKSSDSDSSDSESDTG--KRARHTSKDSKAAKKKKKKK-KHKKKH 239
Query: 135 KK 136
K+
Sbjct: 240 KE 241
Score = 30.0 bits (66), Expect = 0.83
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 95 YSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSE 151
YS EE+ ++ K + EK ++ S+K K KK+KK R ++ S + SE
Sbjct: 155 YSLIPDEEEEKEEAKSA--EFEKPDPTRNPSRKRKKEKKKKKHRDRKSSDSDSSDSE 209
>gi|151301228 formin binding protein 3 [Homo sapiens]
Length = 930
Score = 56.2 bits (134), Expect = 1e-08
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 46 STSSEDSDEENEELNKLQALQEKRINEEE----EKKKEKSKEKIKLKKKRKRSYSSSSTE 101
S S DSD+++ K + E R E E ++ K K KK +KR + S S E
Sbjct: 801 SRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHKSDSPE 860
Query: 102 EDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFS 153
D ++K +K + +E +K++ + + K HK KKK K+ + + SE S
Sbjct: 861 SDAEREKDKKEKDRESEKDRTRQRSESK-HKSPKKKTGKDSGNWDTSGSELS 911
Score = 53.1 bits (126), Expect = 9e-08
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 67 EKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSK 126
E K K+ SK+ K +KR RS S S +++D S KK++ + + + + S S
Sbjct: 774 EHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSA 833
Query: 127 KG----KHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+ K KK KKK KK +H S S+ R+
Sbjct: 834 ESERSYKKSKKHKKKSKKRRHKSDSPESDAERE 866
Score = 47.0 bits (110), Expect = 7e-06
Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKKEKSK---EKIKLKKKRKRSYSSSSTEEDTSK 106
E + + NK + + K+ + + + + S + KKKR+RS S S++E +S
Sbjct: 774 EHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSA 833
Query: 107 QKKQKYQKKEKKKEKKSKSKKGKHH------KKEKKKRKKEKHSSTPNSSEFS 153
+ ++ Y KK KK +KKSK ++ K ++EK K++K++ S + + S
Sbjct: 834 ESERSY-KKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDRESEKDRTRQRS 885
Score = 35.0 bits (79), Expect = 0.026
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 27/138 (19%)
Query: 44 VSSTSSEDSDEENEELNKLQALQEKRINEEEEKK-----------KEKSKEKIKLKKKRK 92
+ S E S EE +K + + + +EEE+ KE++K+ K K K
Sbjct: 321 IQDQSVEVSSNTGEETSKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKEK 380
Query: 93 RSYSSSSTEEDTS--------------KQKKQKYQ--KKEKKKEKKSKSKKGKHHKKEKK 136
R S++S E+ +KKQ + K + +KE+K +++ KE
Sbjct: 381 RVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESF 440
Query: 137 KRKKEKHSSTPNSSEFSR 154
+R E H +++ + +
Sbjct: 441 QRFLENHEKMTSTTRYKK 458
Score = 31.2 bits (69), Expect = 0.37
Identities = 37/167 (22%), Positives = 62/167 (37%), Gaps = 50/167 (29%)
Query: 39 DIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSK---------------- 82
D V +SST + + +L EK E E++KE+++
Sbjct: 671 DFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQA 730
Query: 83 -----------------------EKIKLKKKRKRSYSS----SSTEEDTSKQKKQKYQKK 115
E I L+ +RKR + E K +K+ KK
Sbjct: 731 APPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKK 790
Query: 116 EKK-KEKKSKSKKGK------HHKKEKKKRKKEKHSSTPNSSEFSRK 155
KK K+S+S+ G H K+K++R + + +S +SS S +
Sbjct: 791 SKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESER 837
Score = 30.0 bits (66), Expect = 0.83
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 52 SDEENEELNKLQALQEKRI----NEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEE-DTSK 106
S EE +L A+Q++ + N EE K+++ KK+ + S + T +T +
Sbjct: 308 STEEQAQLTSTPAIQDQSVEVSSNTGEETSKQETVADFTPKKEEEESQPAKKTYTWNTKE 367
Query: 107 QKKQKYQKKEKKKEKKSKS 125
+ KQ + KE KEK+ S
Sbjct: 368 EAKQAF--KELLKEKRVPS 384
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 55.5 bits (132), Expect = 2e-08
Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 76 KKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKH----- 130
K K K +EK + K S SSS ++ + Q E E+KSK +K KH
Sbjct: 180 KSKVKKEEKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKKKHRKNSR 239
Query: 131 -HKKEKKKRKKEKHSSTPNS 149
HKKEKKKRKK K S++ S
Sbjct: 240 KHKKEKKKRKKSKKSASSES 259
Score = 51.6 bits (122), Expect = 3e-07
Identities = 32/123 (26%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 31 FLRVDPKRDIVLDVSSTSSEDSDEENEELNKLQA--LQEKRINEEEEKKKEKSKEKIKLK 88
F +V +++V ++ + ++ + + E+ L L K ++EEKK+ KS
Sbjct: 141 FGQVISGQEVVREIENQKTDAASKPFAEVRILSCGELIPKSKVKKEEKKRHKSSSSSSSS 200
Query: 89 KKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPN 148
S S S + D+S + +K +K+K+K K+ + KH K++KK++K +K +S+ +
Sbjct: 201 SSDSDSSSDSQSSSDSSDSESATEEKSKKRKKKHRKNSR-KHKKEKKKRKKSKKSASSES 259
Query: 149 SSE 151
+E
Sbjct: 260 EAE 262
Score = 50.4 bits (119), Expect = 6e-07
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 20/127 (15%)
Query: 48 SSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQ 107
+SE D+ ++ K + + ++E+ K KE+ + + ++KR RS S E+ ++
Sbjct: 441 NSEKDDKYKNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEK 500
Query: 108 KKQKYQK---------KEKKKEKKSKSKKGKHHKKEKKKRK-----------KEKHSSTP 147
+KQ K KEK K+ +SKS + H K ++K R+ K KHS
Sbjct: 501 EKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNS 560
Query: 148 NSSEFSR 154
+ E SR
Sbjct: 561 RTRERSR 567
Score = 48.5 bits (114), Expect = 2e-06
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 33 RVDPKRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRK 92
R + K V D S S E N E + +K N+ +++ K KS+ K K K K K
Sbjct: 418 RKNEKEKKVKDHKSNSKERDIRRNSEKD------DKYKNKVKKRAKSKSRSKSKEKSKSK 471
Query: 93 RSYSSSSTEEDTSKQKKQKYQKKE--KKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSS 150
S + E+ + + K + E K+KEK+S S KGK ++ + K K ++ S N
Sbjct: 472 ERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDS-KGKDQERSRSKEKSKQLESKSNEH 530
Query: 151 EFSR 154
+ S+
Sbjct: 531 DHSK 534
Score = 47.8 bits (112), Expect = 4e-06
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 14/133 (10%)
Query: 35 DPKRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKS--------KEKIK 86
+ KR SS+SS DSD ++ + + + EE+ KK++K K++ K
Sbjct: 187 EKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKKKHRKNSRKHKKEKK 246
Query: 87 LKKKRKRSYSSSSTEEDTSKQKKQKYQKK------EKKKEKKSKSKKGKHHKKEKKKRKK 140
+KK K+S SS S E+ Q + + + E + + K +++ ++R++
Sbjct: 247 KRKKSKKSASSESEAENLEAQPQSTVRPEEIPPIPENRFLMRKSPPKADEKERKNRERER 306
Query: 141 EKHSSTPNSSEFS 153
E+ + PNS S
Sbjct: 307 ERECNPPNSQPAS 319
Score = 47.8 bits (112), Expect = 4e-06
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 49 SEDSDEENEELNKLQALQEKRINEEEEKKKEKS-KEKIKLKKKRKRSYSSSSTEEDTSKQ 107
SE + +NE+ K++ + + + EK K K K+KK+ K S S E+ SK+
Sbjct: 413 SESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKEKSKSKE 472
Query: 108 KKQKYQKKEKKKEKKSKSKKGKHH---KKEKKKRKKEKHSSTPNSSEFSRK 155
+ K+ + E+K+ +S+SK H +KEK+ K K S E S++
Sbjct: 473 RDSKHNRNEEKR-MRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQ 522
Score = 43.5 bits (101), Expect = 7e-05
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 55 ENEELNKLQALQEKRINEEEEKKKE-----KSKEKIKLKKKRKRSYSSSSTEEDTSK--Q 107
+ ELN+++ Q + +E K + +S + K+K+ + + S+S E D + +
Sbjct: 384 DKSELNEIKENQRSPVRVKERKITDHRNVSESPNRKNEKEKKVKDHKSNSKERDIRRNSE 443
Query: 108 KKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSR 154
K KY+ K KK+ K K K +K K K + KH+ SR
Sbjct: 444 KDDKYKNKVKKRAKSKSRSKSK--EKSKSKERDSKHNRNEEKRMRSR 488
Score = 40.8 bits (94), Expect = 5e-04
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Query: 45 SSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDT 104
S +S + E+E+ ++ N EKK ++ + K+ SS E +
Sbjct: 649 SKSSHRKENSESEKRMYSKSRDHNSSNNSREKKADRDQSPFSKIKQ-----SSQDNELKS 703
Query: 105 SKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSE 151
S K ++ +K EK+++ KG+ + +K KK H S+P + E
Sbjct: 704 SMLKNKEDEKIRSSVEKENQKSKGQENDHVHEKNKKFDHESSPGTDE 750
Score = 40.4 bits (93), Expect = 6e-04
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 10/122 (8%)
Query: 38 RDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSS 97
RD V S + + ++E ++ + + +R +++ + + K +R+R S
Sbjct: 569 RDRSRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRRRRRDS 628
Query: 98 SSTE-EDTSKQKKQKYQKKEKK---------KEKKSKSKKGKHHKKEKKKRKKEKHSSTP 147
S+E E++ + K KY+ +E K EK+ SK H+ + KK +P
Sbjct: 629 RSSEREESQSRNKDKYRNQESKSSHRKENSESEKRMYSKSRDHNSSNNSREKKADRDQSP 688
Query: 148 NS 149
S
Sbjct: 689 FS 690
Score = 38.9 bits (89), Expect = 0.002
Identities = 22/100 (22%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 48 SSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRK-RSYSSSSTEEDTSK 106
S + +EE ++ + + + E+E++ K K++ + + K K + S S E D SK
Sbjct: 475 SKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSK 534
Query: 107 QKKQKYQKKEKKKEKKSKSKKGKH-HKKEKKKRKKEKHSS 145
K++ ++ + + ++ KGKH + ++R + + S
Sbjct: 535 SKEK--DRRAQSRSRECDITKGKHSYNSRTRERSRSRDRS 572
Score = 38.5 bits (88), Expect = 0.002
Identities = 23/138 (16%), Positives = 58/138 (42%), Gaps = 29/138 (21%)
Query: 47 TSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKK------KRKRSYSSSST 100
+ S+ D+E + E + NE + K ++ + + + K K SY+S +
Sbjct: 504 SDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTR 563
Query: 101 EEDTSKQ-----------------------KKQKYQKKEKKKEKKSKSKKGKHHKKEKKK 137
E S+ ++Q+Y+++ + + ++ ++ G+ K++++
Sbjct: 564 ERSRSRDRSRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRR 623
Query: 138 RKKEKHSSTPNSSEFSRK 155
R+++ SS S+ K
Sbjct: 624 RRRDSRSSEREESQSRNK 641
Score = 35.8 bits (81), Expect = 0.015
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 80 KSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRK 139
KSK K + KK+ K S SSSS+ D+ + + S + +K KK++K
Sbjct: 180 KSKVKKEEKKRHKSSSSSSSSSSDSDSSS-------DSQSSSDSSDSESATEEKSKKRKK 232
Query: 140 KEKHSSTPNSSEFSRK 155
K + +S + E ++
Sbjct: 233 KHRKNSRKHKKEKKKR 248
Score = 30.0 bits (66), Expect = 0.83
Identities = 15/81 (18%), Positives = 35/81 (43%)
Query: 71 NEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKH 130
+ E E+ + ++K+K + ++ + +S E K + + +EKK+ +
Sbjct: 630 SSEREESQSRNKDKYRNQESKSSHRKENSESEKRMYSKSRDHNSSNNSREKKADRDQSPF 689
Query: 131 HKKEKKKRKKEKHSSTPNSSE 151
K ++ + E SS + E
Sbjct: 690 SKIKQSSQDNELKSSMLKNKE 710
>gi|117553580 adaptor-related protein complex 3, delta 1 subunit
isoform 2 [Homo sapiens]
Length = 1153
Score = 54.3 bits (129), Expect = 4e-08
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 19/129 (14%)
Query: 39 DIVLDVSSTSSEDSDEENEELNK-LQALQ---------------EKRINEEEEKKKEKSK 82
DIV + ++ SDE++++ N +AL +K N E K EK
Sbjct: 775 DIVTEEMPENALPSDEDDKDPNDPYRALDIDLDKPLADSEKLPIQKHRNTETSKSPEKDV 834
Query: 83 EKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEK 142
++ K K+ + E++ K+KK++ KEKKK K K KK + K+E+ K KK+
Sbjct: 835 PMVEKKSKKPKKKEKKHKEKERDKEKKKE---KEKKKSPKPKKKKHRKEKEERTKGKKKS 891
Query: 143 HSSTPNSSE 151
P S E
Sbjct: 892 KKQPPGSEE 900
Score = 43.1 bits (100), Expect = 9e-05
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Query: 35 DPKR--DIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRK 92
DP R DI LD SE + + EK + E+K K+ K++ K K+K +
Sbjct: 797 DPYRALDIDLDKPLADSEKLPIQKHRNTETSKSPEKDVPMVEKKSKKPKKKEKKHKEKER 856
Query: 93 RSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSE 151
E+ S + K+K +KEK++ K K K K ++ + + P +
Sbjct: 857 DKEKKKEKEKKKSPKPKKKKHRKEKEERTKGKKKSKKQPPGSEEAAGEPVQNGAPEEEQ 915
Score = 37.0 bits (84), Expect = 0.007
Identities = 38/159 (23%), Positives = 61/159 (38%), Gaps = 59/159 (37%)
Query: 56 NEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEE------------- 102
+++ KL+ + R E++K+++K KEK K K+R S + S E+
Sbjct: 721 SDQYVKLEEERRHRQKLEKDKRRKKRKEKEKKGKRRHSSLPTESDEDIAPAQQVDIVTEE 780
Query: 103 -------------------------------DTSKQKKQKYQKKE------------KKK 119
D+ K QK++ E +KK
Sbjct: 781 MPENALPSDEDDKDPNDPYRALDIDLDKPLADSEKLPIQKHRNTETSKSPEKDVPMVEKK 840
Query: 120 EKKSKSKKGKHHKKEK---KKRKKEKHSSTPNSSEFSRK 155
KK K K+ KH +KE+ KK++KEK S + RK
Sbjct: 841 SKKPKKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRK 879
Score = 36.6 bits (83), Expect = 0.009
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 18/107 (16%)
Query: 63 QALQEKRINEEEEKKKEKSKEKIKLKKK---RKRSYSSSSTEE------DTSKQKK---- 109
+A +E+ E +K+E++ +K +KR + E D S K
Sbjct: 659 EADEEELARRREARKQEQANNPFYIKSSPSPQKRYQDTPGVEHIPVVQIDLSVPLKVPGL 718
Query: 110 ---QKYQKKEKKKEKKSKSKKGKHHKK--EKKKRKKEKHSSTPNSSE 151
+Y K E+++ + K +K K KK EK+K+ K +HSS P S+
Sbjct: 719 PMSDQYVKLEEERRHRQKLEKDKRRKKRKEKEKKGKRRHSSLPTESD 765
Score = 27.3 bits (59), Expect = 5.4
Identities = 16/76 (21%), Positives = 37/76 (48%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKK 109
E +E E + + +EK+ + + +KKK + +++ + K K+K +EE + +
Sbjct: 848 EKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEKEERTKGKKKSKKQPPGSEEAAGEPVQ 907
Query: 110 QKYQKKEKKKEKKSKS 125
++E+ + S S
Sbjct: 908 NGAPEEEQLPPESSYS 923
>gi|22035606 mitogen-activated protein kinase kinase kinase kinase 4
isoform 3 [Homo sapiens]
Length = 1212
Score = 54.3 bits (129), Expect = 4e-08
Identities = 31/139 (22%), Positives = 75/139 (53%), Gaps = 19/139 (13%)
Query: 21 PGHLTFECRNFLRVDPKRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKK-- 78
PG T R+FLR+ +++ E +E L + Q LQE+++ E+EE K+
Sbjct: 347 PGESTLR-RDFLRLQ--------------QENKERSEALRRQQLLQEQQLREQEEYKRQL 391
Query: 79 --EKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKK 136
E+ K + K++R+R E + +Q++++ +++E++++++ + + + ++E++
Sbjct: 392 LAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEER 451
Query: 137 KRKKEKHSSTPNSSEFSRK 155
+R +E+ E+ R+
Sbjct: 452 RRAEEEKRRVEREQEYIRR 470
Score = 33.5 bits (75), Expect = 0.075
Identities = 15/73 (20%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKK 109
E+ E + Q +++R +EE+++ E+ + + K +++R+R + EE +++
Sbjct: 410 EEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRR-----AEEEKRRVERE 464
Query: 110 QKYQKKEKKKEKK 122
Q+Y +++ ++E++
Sbjct: 465 QEYIRRQLEEEQR 477
>gi|22035602 mitogen-activated protein kinase kinase kinase kinase 4
isoform 1 [Homo sapiens]
Length = 1166
Score = 54.3 bits (129), Expect = 4e-08
Identities = 31/139 (22%), Positives = 75/139 (53%), Gaps = 19/139 (13%)
Query: 21 PGHLTFECRNFLRVDPKRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKK-- 78
PG T R+FLR+ +++ E +E L + Q LQE+++ E+EE K+
Sbjct: 347 PGESTLR-RDFLRLQ--------------QENKERSEALRRQQLLQEQQLREQEEYKRQL 391
Query: 79 --EKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKK 136
E+ K + K++R+R E + +Q++++ +++E++++++ + + + ++E++
Sbjct: 392 LAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEER 451
Query: 137 KRKKEKHSSTPNSSEFSRK 155
+R +E+ E+ R+
Sbjct: 452 RRAEEEKRRVEREQEYIRR 470
Score = 33.5 bits (75), Expect = 0.075
Identities = 15/73 (20%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKK 109
E+ E + Q +++R +EE+++ E+ + + K +++R+R + EE +++
Sbjct: 410 EEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRR-----AEEEKRRVERE 464
Query: 110 QKYQKKEKKKEKK 122
Q+Y +++ ++E++
Sbjct: 465 QEYIRRQLEEEQR 477
>gi|22035604 mitogen-activated protein kinase kinase kinase kinase 4
isoform 2 [Homo sapiens]
Length = 1320
Score = 54.3 bits (129), Expect = 4e-08
Identities = 31/139 (22%), Positives = 75/139 (53%), Gaps = 19/139 (13%)
Query: 21 PGHLTFECRNFLRVDPKRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKK-- 78
PG T R+FLR+ +++ E +E L + Q LQE+++ E+EE K+
Sbjct: 347 PGESTLR-RDFLRLQ--------------QENKERSEALRRQQLLQEQQLREQEEYKRQL 391
Query: 79 --EKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKK 136
E+ K + K++R+R E + +Q++++ +++E++++++ + + + ++E++
Sbjct: 392 LAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEER 451
Query: 137 KRKKEKHSSTPNSSEFSRK 155
+R +E+ E+ R+
Sbjct: 452 RRAEEEKRRVEREQEYIRR 470
Score = 33.5 bits (75), Expect = 0.075
Identities = 15/73 (20%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKK 109
E+ E + Q +++R +EE+++ E+ + + K +++R+R + EE +++
Sbjct: 410 EEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRR-----AEEEKRRVERE 464
Query: 110 QKYQKKEKKKEKK 122
Q+Y +++ ++E++
Sbjct: 465 QEYIRRQLEEEQR 477
>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
sapiens]
Length = 956
Score = 53.1 bits (126), Expect = 9e-08
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 10/98 (10%)
Query: 55 ENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQK 114
E EE KL+ + KR EE +KKKE+ KE LK+K +R +E KQ+ ++ ++
Sbjct: 353 EREEKEKLKE-EAKRAKEEAKKKKEEEKE---LKEKERREKREKDEKEKAEKQRLKEERR 408
Query: 115 KEK------KKEKKSKSKKGKHHKKEKKKRKKEKHSST 146
KE+ K E+K K ++ K ++E+K+ K EK T
Sbjct: 409 KERQEALEAKLEEKRKKEEEKRLREEEKRIKAEKAEIT 446
Score = 50.4 bits (119), Expect = 6e-07
Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 55 ENEELNKLQALQEKRINEEEEKKKE---KSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQK 111
+ E L K L+ +R EE+EK KE ++KE+ K KK+ ++ E K +K+K
Sbjct: 340 DQERLGKQLKLRAER--EEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEK 397
Query: 112 YQKKEKKKEKKSKSKKGKHHKKEKKKRKKEK 142
+K+ K+E++ + ++ K E+K++K+E+
Sbjct: 398 AEKQRLKEERRKERQEALEAKLEEKRKKEEE 428
Score = 49.7 bits (117), Expect = 1e-06
Identities = 26/98 (26%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 58 ELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEK 117
E NKL+ +++ ++ K + + +EK KLK++ KR+ + +++ K+ K+K +++++
Sbjct: 331 EKNKLRLQRDQERLGKQLKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKR 390
Query: 118 KKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+K++K K++K ++ K++R+KE+ + E RK
Sbjct: 391 EKDEKEKAEK----QRLKEERRKERQEALEAKLEEKRK 424
Score = 45.1 bits (105), Expect = 2e-05
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 61 KLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEK-KK 119
+LQ QE+ + + + + + KEK+K + KR + + EE+ ++K++ +K+EK +K
Sbjct: 336 RLQRDQERLGKQLKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEK 395
Query: 120 EKKSKSKKGKHHKKEK---------KKRKKEK 142
EK K + + +KE+ +KRKKE+
Sbjct: 396 EKAEKQRLKEERRKERQEALEAKLEEKRKKEE 427
Score = 41.2 bits (95), Expect = 4e-04
Identities = 21/98 (21%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 32 LRVDPKRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKR 91
L++ +R+ + + +E ++ + + L+EK E+ EK +++ EK +LK++R
Sbjct: 348 LKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEER 407
Query: 92 KRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGK 129
++ + E +++K++ +K+ +++EK+ K++K +
Sbjct: 408 RKE-RQEALEAKLEEKRKKEEEKRLREEEKRIKAEKAE 444
Score = 39.3 bits (90), Expect = 0.001
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Query: 36 PKRDIVLDVSSTSSEDSD----------EENEELNKLQALQEKRINEEEEKKKEKSKEKI 85
P+ D VL SS SS S +++ + R ++ K K K+
Sbjct: 276 PEEDSVLSHSSLSSPSSTSSPEGPPAPPKQHSSTSPFPTSTPLRRITKKFVKGSTEKNKL 335
Query: 86 KLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEK 142
+L++ ++R + +++K K + K K+E K K ++ K K+++++ K+EK
Sbjct: 336 RLQRDQERLGKQLKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREK 392
>gi|42718020 retinitis pigmentosa 9 [Homo sapiens]
Length = 221
Score = 53.1 bits (126), Expect = 9e-08
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 63 QALQEKRINEEEEK----KKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKK 118
Q L++ R+ E+ + K EK ++ K+ S+++ED S + ++K KK
Sbjct: 128 QKLEQFRVAHEDPMYDIIRDNKRHEKDVRIQQLKQLLEDSTSDEDRSSSSSSEGKEKHKK 187
Query: 119 KEKKSKSKKGKHHKKEKKKRKKEKHSSTPNS 149
K+KK K KK KKEKKK+KK KH S+ ++
Sbjct: 188 KKKKEKHKK---RKKEKKKKKKRKHKSSKSN 215
Score = 51.2 bits (121), Expect = 3e-07
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 6 CNKDSVRAGCKKCGY--PGHLTFECRNFLRVDPKRDIVLDVSSTSSEDSDEENEELNKLQ 63
C + R G K+C + G+ E DP DI+ D E++ + +L+
Sbjct: 108 CKRYGHRTGDKECPFFIKGNQKLEQFRVAHEDPMYDIIRD------NKRHEKDVRIQQLK 161
Query: 64 ALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKS 123
L E ++E+ S+ K K KKK+K+ E K+KK+K +KK+K+K K S
Sbjct: 162 QLLEDSTSDEDRSSSSSSEGKEKHKKKKKK--------EKHKKRKKEK-KKKKKRKHKSS 212
Query: 124 KSKKG 128
KS +G
Sbjct: 213 KSNEG 217
Score = 33.5 bits (75), Expect = 0.075
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 101 EEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
E+D Q+ ++ + E +S S + +K KKK+KKEKH + +K
Sbjct: 152 EKDVRIQQLKQLLEDSTSDEDRSSSSSSEGKEKHKKKKKKEKHKKRKKEKKKKKK 206
>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
Length = 709
Score = 52.4 bits (124), Expect = 2e-07
Identities = 34/116 (29%), Positives = 65/116 (56%), Gaps = 6/116 (5%)
Query: 44 VSSTSSEDSDEENEELNK--LQALQEKRINEEEEKKKEKSKE--KIKLKKKRKRSYSSSS 99
+S E+ D + E+ + +A++E E K++KSK+ K+K+K ++K + S S
Sbjct: 588 MSKEKKEEWDRKAEDARRDYEKAMKEYEGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGS 647
Query: 100 TEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKR--KKEKHSSTPNSSEFS 153
+ + +S+Q + ++ KE +S S + K KK ++ ++E+ +STP SSE S
Sbjct: 648 SSKSSSRQLSESFKSKEFVSSDESSSGENKSKKKRRRSEDSEEEELASTPPSSEDS 703
Score = 34.7 bits (78), Expect = 0.034
Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Query: 51 DSDEEN-----EELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTS 105
DSDE+ E + + ++E+ N+ + E++ E ++ + + S
Sbjct: 443 DSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETDESFNPGEEEEDVAEEFDSNASAS 502
Query: 106 KQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNS 149
+ +++KK K+ K K +K +KK + K PN+
Sbjct: 503 SSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPVEVKKGKDPNA 546
Score = 34.3 bits (77), Expect = 0.044
Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 40/150 (26%)
Query: 45 SSTSSEDSDEENEELNKLQALQEKRINEEEEKKK------------------------EK 80
+S+SS + D + +E + Q + K + + +KK
Sbjct: 501 ASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLWLNA 560
Query: 81 SKEKIK----------LKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKS------K 124
S+EKIK L KK + S E+ +K + +++ +K K +
Sbjct: 561 SREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYEGGRGE 620
Query: 125 SKKGKHHKKEKKKRKKEKHSSTPNSSEFSR 154
S K KK+KK + K + STP+ S+
Sbjct: 621 SSKRDKSKKKKKVKVKMEKKSTPSRGSSSK 650
>gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1
[Homo sapiens]
Length = 759
Score = 52.0 bits (123), Expect = 2e-07
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 21/112 (18%)
Query: 43 DVSSTSSEDSDEEN---------EELNKLQALQEKR--------INEEEEKKKEKSKEKI 85
D S+++SE+S+ EN + L K Q ++ N K++ E+
Sbjct: 115 DDSASTSEESENENPHARGSFSYKSLRKGGPSQREQYLPGAIALFNVNNSSNKDQEPEEK 174
Query: 86 KLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKK 137
K KKK K+S S E +KK KK+K KEKK K +K K K+E+KK
Sbjct: 175 KKKKKEKKSKSDDKNENKNDPEKK----KKKKDKEKKKKEEKSKDKKEEEKK 222
Score = 33.5 bits (75), Expect = 0.075
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 41 VLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSST 100
+ +V+++S++D + E ++ K + + E + EK K+K +KK+K S
Sbjct: 158 LFNVNNSSNKDQEPEEKKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKKKKEEKSKDKK 217
Query: 101 EED 103
EE+
Sbjct: 218 EEE 220
>gi|71143141 cyclic nucleotide gated channel alpha 1 isoform 2 [Homo
sapiens]
Length = 690
Score = 52.0 bits (123), Expect = 2e-07
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 21/112 (18%)
Query: 43 DVSSTSSEDSDEEN---------EELNKLQALQEKR--------INEEEEKKKEKSKEKI 85
D S+++SE+S+ EN + L K Q ++ N K++ E+
Sbjct: 46 DDSASTSEESENENPHARGSFSYKSLRKGGPSQREQYLPGAIALFNVNNSSNKDQEPEEK 105
Query: 86 KLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKK 137
K KKK K+S S E +KK KK+K KEKK K +K K K+E+KK
Sbjct: 106 KKKKKEKKSKSDDKNENKNDPEKK----KKKKDKEKKKKEEKSKDKKEEEKK 153
Score = 33.5 bits (75), Expect = 0.075
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 41 VLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSST 100
+ +V+++S++D + E ++ K + + E + EK K+K +KK+K S
Sbjct: 89 LFNVNNSSNKDQEPEEKKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKKKKEEKSKDKK 148
Query: 101 EED 103
EE+
Sbjct: 149 EEE 151
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 52.0 bits (123), Expect = 2e-07
Identities = 32/117 (27%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Query: 36 PKRDIVLDVSSTSSED--SDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKR 93
PK V SE+ S+E L++L+ + EEEE+++E+ +E+ +++++ +
Sbjct: 2209 PKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEE- 2267
Query: 94 SYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSS 150
EE+ ++K+ + +++EKKK+KK K K+ K+E + K+E S S
Sbjct: 2268 ----ERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETES 2320
Score = 45.8 bits (107), Expect = 1e-05
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEE----KKKEKSKEKIKLKKKRKRSYSSSSTEEDT- 104
E+ EE EE + + +EK++ +EEE KKKEK KE+++ K++ +EE+T
Sbjct: 2260 EEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETE 2319
Query: 105 ----SKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRK 139
+++++ +E+ +K KK K K ++++RK
Sbjct: 2320 SLSDEEEEEESCSLEEEVDREKEILKKEKQFKLQEQRRK 2358
Score = 44.3 bits (103), Expect = 4e-05
Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 41 VLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSST 100
+LD S EE EE + + +E+ + EEEE++KE+ + + K +K
Sbjct: 2233 LLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKE--------- 2283
Query: 101 EEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSE 151
EE+ K+KK+K +++ ++KE+ + K+ ++E + E+ S E
Sbjct: 2284 EEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSLE 2334
Score = 43.9 bits (102), Expect = 6e-05
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 23 HLTFECRNFLRVDPKRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSK 82
H + E + L K++ + E+ +E EE + + + K E EEK+ EK +
Sbjct: 2225 HFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEE 2284
Query: 83 EKIKLKKKRKRSYS-------SSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEK 135
E+ K KKK K+ EE S+++ + +E+++E S ++ K+
Sbjct: 2285 EEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSLEEEVDREKEIL 2344
Query: 136 KKRKKEK 142
KK K+ K
Sbjct: 2345 KKEKQFK 2351
Score = 42.7 bits (99), Expect = 1e-04
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 11/88 (12%)
Query: 57 EELNKLQALQEKRINEEEE---KKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQ 113
+E KL +EK EEE K+++ ++K+KL +KR+R +S E+ +K K YQ
Sbjct: 1779 QEKEKLAQHKEKMPEEEERLGRKREQLIEKKMKLAQKRERWINSM---EELTKNKMILYQ 1835
Query: 114 KKEKKKEKKSKSKKGKHHKKEKKKRKKE 141
KK +EKK+ ++ +KEK ++KE
Sbjct: 1836 KKNLAQEKKNLAQ-----EKEKLAQRKE 1858
Score = 38.5 bits (88), Expect = 0.002
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKK 109
E+ + EELN+ +E ++ EE++K E+ + ++K + + EE+ Q+K
Sbjct: 1726 EELSWKEEELNQ----EEGKLVEEKKKLAEEEEALAWQREKLSEEETKLAQEEELLIQEK 1781
Query: 110 QKY-QKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSE 151
+K Q KEK E++ + + + EKK + +K NS E
Sbjct: 1782 EKLAQHKEKMPEEEERLGRKREQLIEKKMKLAQKRERWINSME 1824
Score = 38.5 bits (88), Expect = 0.002
Identities = 26/126 (20%), Positives = 58/126 (46%), Gaps = 21/126 (16%)
Query: 51 DSDEEN--EELNKLQALQEKRINEEEEKKKEKSKEKIK-------------------LKK 89
D +EE EE + L+ + +E K+ +K KEK L +
Sbjct: 2177 DDEEEGGIEEEEVIPFLKRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDE 2236
Query: 90 KRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNS 149
K+ SS EE+ ++++++ ++ +++E++ + ++G+ + EK++ +K+K
Sbjct: 2237 LEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKK 2296
Query: 150 SEFSRK 155
E K
Sbjct: 2297 EEVQEK 2302
Score = 35.8 bits (81), Expect = 0.015
Identities = 21/91 (23%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKK 109
E+ E EE K + +EK+ EE ++K+E +EK ++ + + S EE+ S +
Sbjct: 2276 EEKQVEKEEEEKKKKKKEKK-KEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSLE 2334
Query: 110 QKYQKKEKKKEKKSKSKKGKHHKKEKKKRKK 140
++ ++++ +K+ + K + +K + R++
Sbjct: 2335 EEVDREKEILKKEKQFKLQEQRRKSLRGRER 2365
Score = 34.7 bits (78), Expect = 0.034
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 45 SSTS----SEDSDEENEELNKLQ-ALQEKRINEEEEKKKEKSK-EKIKLKKKRKRSYSSS 98
SSTS S+D D + ++++K AL KR+ + +K+ +K+ +K+K K K+K +
Sbjct: 1142 SSTSVIKLSKDVDSQEKDISKDHIALTLKRLQKIRDKRDKKATAQKLKKKHKKKGKEAKV 1201
Query: 99 STEEDTSKQKKQKYQKKEKKKEKKSKSKKGK 129
EE T +Q KK K + + + G+
Sbjct: 1202 INEETTPPVMEQPVTKKVKIQGRGASGISGR 1232
Score = 33.9 bits (76), Expect = 0.058
Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 47 TSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSK 106
T E+ E EE + Q +E+R +EE K +++ + +KKR + + EE+
Sbjct: 1545 TLEEEVSREGEEKEQ-QVTEEQRHIQEEHKWARIHRKRARAEKKRAQEERKLAQEEEKLA 1603
Query: 107 QKKQKYQKKEKK----------KEKKSKSKKGKHHKKEK 135
Q++++ ++E+K +++ +GK +KE+
Sbjct: 1604 QEERQLAQEERKLAQAYVKITQDDREMAQAEGKFAQKEE 1642
Score = 32.7 bits (73), Expect = 0.13
Identities = 22/99 (22%), Positives = 55/99 (55%), Gaps = 13/99 (13%)
Query: 44 VSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEED 103
+SS S E ++ EE+ L+E+ E EEK+++ ++E+ ++++ K +
Sbjct: 1529 LSSKSKEQQYKDEEEVT----LEEEVSREGEEKEQQVTEEQRHIQEEHKWA--------- 1575
Query: 104 TSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEK 142
+K+ + +KK ++E+K ++ K ++E++ ++E+
Sbjct: 1576 RIHRKRARAEKKRAQEERKLAQEEEKLAQEERQLAQEER 1614
Score = 31.2 bits (69), Expect = 0.37
Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 40 IVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEE--KKKEK---SKEKIKLKKKRKRS 94
I+ V +++ + ++ KL ++K + E+ KK+EK K K+ L+K +
Sbjct: 1887 ILAQVEEKLTQEKETVIKKKEKLAETEKKLVQVEDSLAKKQEKLAQEKMKLALEKAMVQG 1946
Query: 95 YSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKH--HKKEKKKRKKEKHSSTPNSSEF 152
E D +K++K + ++ E+K + +GK K E + +++ + F
Sbjct: 1947 KKRLRGELDIAKEEKALNLEMKRLAEEKMRLVEGKETLSKGETPETSRQRKMTQVEQELF 2006
Query: 153 SRK 155
RK
Sbjct: 2007 ERK 2009
Score = 31.2 bits (69), Expect = 0.37
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 43 DVSSTSSEDSDEENEELNKLQALQEKR---INEEEEKKKEKSKEKIKLKKKRKRSYSSSS 99
D S SE + +E + K + L K IN+EE+ +E+SK RK S
Sbjct: 2124 DFSEKRSELTKDEKKLARKQRKLANKMRRMINKEEKMTEEESK------LARKHSEVILD 2177
Query: 100 TEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSE 151
EE+ ++++ +++ K+ ++K+G K++ + E S S E
Sbjct: 2178 DEEEGGIEEEEVIPFLKRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEE 2229
Score = 30.4 bits (67), Expect = 0.64
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 92 KRSYSSSSTEEDTSKQK----KQKYQKKEKKKEKKSKSKK-GKHHKKEKKKRKKEKHSST 146
K S S E+D SK ++ QK K++KK+ ++K K HKK+ K+ K +T
Sbjct: 1148 KLSKDVDSQEKDISKDHIALTLKRLQKIRDKRDKKATAQKLKKKHKKKGKEAKVINEETT 1207
Query: 147 P 147
P
Sbjct: 1208 P 1208
Score = 30.4 bits (67), Expect = 0.64
Identities = 19/95 (20%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 53 DEENEELNKLQALQEKRINEEEEKKKEKSKE------KIKLKKKRKRSYSSSSTEEDTSK 106
+E+ + + + +E+ + E+++ K E+ K+ K K+++ + + EE+ S+
Sbjct: 1493 EEKLHQAGEKLSPEEEMLQEDKKLKWEEWKQVWENMLSSKSKEQQYKDEEEVTLEEEVSR 1552
Query: 107 QKKQKYQK-KEKKKEKKSKSKKGKHHKKEKKKRKK 140
+ ++K Q+ E+++ + + K + H+K + KK
Sbjct: 1553 EGEEKEQQVTEEQRHIQEEHKWARIHRKRARAEKK 1587
Score = 30.4 bits (67), Expect = 0.64
Identities = 22/87 (25%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 61 KLQALQEKRINEEEEK-KKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKE--- 116
K +A +E+++ +EEEK +E+ ++ + ++K ++Y + ++ Q + K+ +KE
Sbjct: 1586 KKRAQEERKLAQEEEKLAQEE-RQLAQEERKLAQAYVKITQDDREMAQAEGKFAQKEETL 1644
Query: 117 -KKKEKKSKSKKGKHHKKEKKKRKKEK 142
++ EK S+ + K++K +K EK
Sbjct: 1645 AQRGEKLSQEAEKLAQKRKKLAKKWEK 1671
Score = 30.0 bits (66), Expect = 0.83
Identities = 21/101 (20%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 50 EDSDEENEELN--KLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSS---TEEDT 104
E+ +E+++L + + + E ++ + ++++ K +E++ L+++ R TEE
Sbjct: 1507 EEMLQEDKKLKWEEWKQVWENMLSSKSKEQQYKDEEEVTLEEEVSREGEEKEQQVTEEQR 1566
Query: 105 SKQKKQKY---QKKEKKKEKKSKSKKGKHHKKEKKKRKKEK 142
Q++ K+ +K + EKK ++ K ++E+K ++E+
Sbjct: 1567 HIQEEHKWARIHRKRARAEKKRAQEERKLAQEEEKLAQEER 1607
Score = 29.6 bits (65), Expect = 1.1
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 54 EENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKY- 112
+E E+L A +E+++ +EE K + + + ++ ++ + +E+T Q+ +K
Sbjct: 1597 QEEEKL----AQEERQLAQEERKLAQAYVKITQDDREMAQAEGKFAQKEETLAQRGEKLS 1652
Query: 113 QKKEKKKEKKSKSKKGKHHKKEKKKRKKEK 142
Q+ EK +K+ K K K EK R++EK
Sbjct: 1653 QEAEKLAQKRKKLAK----KWEKVAREEEK 1678
Score = 29.6 bits (65), Expect = 1.1
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 35 DPKRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRS 94
+ K +I+ + + S D +EE E + L+E+ E+E KKEK + KL+++R++S
Sbjct: 2307 EEKEEIMSEEETESLSDEEEEEESCS----LEEEVDREKEILKKEK---QFKLQEQRRKS 2359
Score = 29.3 bits (64), Expect = 1.4
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 60 NKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQK-------Y 112
NK+ A E+++ +E+E +K ++ + +KK + S + +++ Q+K K
Sbjct: 1885 NKILAQVEEKLTQEKETVIKKKEKLAETEKKLVQVEDSLAKKQEKLAQEKMKLALEKAMV 1944
Query: 113 QKKEKKKEKKSKSKKGKHHKKEKKKRKKEK 142
Q K++ + + +K+ K E K+ +EK
Sbjct: 1945 QGKKRLRGELDIAKEEKALNLEMKRLAEEK 1974
Score = 27.7 bits (60), Expect = 4.1
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 73 EEEKKKEKSKEKIKLKKKR---KRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGK 129
EEE+ ++K+++ + L++ + K+ E K+ KKE+KK + K+G+
Sbjct: 1346 EEEQAQKKARDMLGLEETQVILKKGKKVIFLEPGNVTMGKE-ISKKEEKKTFQKSPKQGR 1404
Query: 130 HHKKEKKKRKKEKHSSTPNSSEFSRK 155
++++K K K T + S +
Sbjct: 1405 KAVQKERKVGKIKREMTKEERDMSEE 1430
Score = 27.7 bits (60), Expect = 4.1
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 37 KRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKR-SY 95
K ++L +++ +E KL +E + +E K K+ +++K K +
Sbjct: 1828 KNKMILYQKKNLAQEKKNLAQEKEKLAQRKENLLYNKERLTHSK-KQLVQVKNKLGMFNK 1886
Query: 96 SSSSTEEDTSKQKKQKYQKKEKKKEKKSK--------SKKGKHHKKEKKKRKKEK 142
+ EE +++K+ +KKEK E + K +KK + +EK K EK
Sbjct: 1887 ILAQVEEKLTQEKETVIKKKEKLAETEKKLVQVEDSLAKKQEKLAQEKMKLALEK 1941
Score = 26.6 bits (57), Expect = 9.2
Identities = 16/81 (19%), Positives = 37/81 (45%)
Query: 73 EEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHK 132
++EKK + + K+ K +R + TEE++ +K + ++E + ++
Sbjct: 2134 KDEKKLARKQRKLANKMRRMINKEEKMTEEESKLARKHSEVILDDEEEGGIEEEEVIPFL 2193
Query: 133 KEKKKRKKEKHSSTPNSSEFS 153
K + +++KE +FS
Sbjct: 2194 KRRWRKRKEAKRGDKPKEKFS 2214
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 52.0 bits (123), Expect = 2e-07
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 50 EDSDEENEELNK--LQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSS-------- 99
ED DE++ +L+K L A +E+ N+++ ++ +SK + + RS S SS
Sbjct: 171 EDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSR 230
Query: 100 TEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+ +S Q + + +E+ + + SKS+ + +K +SS+ +S E +RK
Sbjct: 231 SRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRK 286
Score = 39.7 bits (91), Expect = 0.001
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKK 109
ED + E EE ++ + L + +++E+E++ + L K Y+ ++EE+ S +KK
Sbjct: 149 EDKESEGEEEDEDEDLSKYKLDEDEDE------DDADLSK-----YNLDASEEEDSNKKK 197
Query: 110 QKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSR 154
+ + K + S+S + R + + S+ +S SR
Sbjct: 198 SNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSR 242
Score = 36.2 bits (82), Expect = 0.012
Identities = 22/107 (20%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Query: 45 SSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDT 104
SS SS S + ++ ++ + + +E+S+ + + RS+ SS+
Sbjct: 214 SSRSSSPSSSRSRSRSRSRSSSSSQ-SRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKR 272
Query: 105 SKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKE-KHSSTPNSS 150
S ++ +K+ + S G K+ + R E +H S+ SS
Sbjct: 273 SYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPERRHRSSSGSS 319
Score = 36.2 bits (82), Expect = 0.012
Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Query: 46 STSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTS 105
S S S + ++ ++ +R K + S+ RKRSYSSSS+ + +
Sbjct: 225 SRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERN 284
Query: 106 KQKKQKYQKKE---KKKEKKSKSKKGKHHKKEKKKRKKEKHSS 145
+++ + KK+ +S+S + +H + SS
Sbjct: 285 RKRSRSRSSSSGDRKKRRTRSRSPERRHRSSSGSSHSGSRSSS 327
Score = 34.7 bits (78), Expect = 0.034
Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 8/104 (7%)
Query: 46 STSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTS 105
S S S ++ ++ + + R + + +S +KR S SSSS E +
Sbjct: 227 SRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRK 286
Query: 106 KQKKQKYQKKEKKK--------EKKSKSKKGKHHKKEKKKRKKE 141
+ + + ++KK E++ +S G H + KK+
Sbjct: 287 RSRSRSSSSGDRKKRRTRSRSPERRHRSSSGSSHSGSRSSSKKK 330
Score = 32.0 bits (71), Expect = 0.22
Identities = 31/146 (21%), Positives = 57/146 (39%), Gaps = 5/146 (3%)
Query: 12 RAGCKKCGYPGHLTFECRN-FLRVDPKRDIVLDVSSTSSEDSDEENEELN-KLQALQEKR 69
R+ C C P + E R + +R+ +V E+SD E +E K + + K
Sbjct: 82 RSECNMCNTPKYAKLEERTGYGGGFNERE---NVEYIEREESDGEYDEFGRKKKKYRGKA 138
Query: 70 INEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGK 129
+ K+ + KE ++ S +ED + + E++ +KK
Sbjct: 139 VGPASILKEVEDKESEGEEEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKS 198
Query: 130 HHKKEKKKRKKEKHSSTPNSSEFSRK 155
+ + K R SS+ +SS S +
Sbjct: 199 NRRSRSKSRSSHSRSSSRSSSPSSSR 224
>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
Length = 320
Score = 52.0 bits (123), Expect = 2e-07
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 50 EDSDEENEELNK--LQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSS-------- 99
ED DE++ +L+K L A +E+ N+++ ++ +SK + + RS S SS
Sbjct: 171 EDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSR 230
Query: 100 TEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
+ +S Q + + +E+ + + SKS+ + +K +SS+ +S E +RK
Sbjct: 231 SRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRK 286
Score = 39.7 bits (91), Expect = 0.001
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 50 EDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKK 109
ED + E EE ++ + L + +++E+E++ + L K Y+ ++EE+ S +KK
Sbjct: 149 EDKESEGEEEDEDEDLSKYKLDEDEDE------DDADLSK-----YNLDASEEEDSNKKK 197
Query: 110 QKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSR 154
+ + K + S+S + R + + S+ +S SR
Sbjct: 198 SNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSR 242
Score = 33.5 bits (75), Expect = 0.075
Identities = 19/107 (17%), Positives = 42/107 (39%), Gaps = 1/107 (0%)
Query: 45 SSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDT 104
SS SS S + ++ ++ + + +E+S+ + + RS+ SS+
Sbjct: 214 SSRSSSPSSSRSRSRSRSRSSSSSQ-SRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKR 272
Query: 105 SKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSE 151
S ++ +K+ + S G K+ + R E N+ +
Sbjct: 273 SYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPESQVIGENTKQ 319
Score = 32.0 bits (71), Expect = 0.22
Identities = 31/146 (21%), Positives = 57/146 (39%), Gaps = 5/146 (3%)
Query: 12 RAGCKKCGYPGHLTFECRN-FLRVDPKRDIVLDVSSTSSEDSDEENEELN-KLQALQEKR 69
R+ C C P + E R + +R+ +V E+SD E +E K + + K
Sbjct: 82 RSECNMCNTPKYAKLEERTGYGGGFNERE---NVEYIEREESDGEYDEFGRKKKKYRGKA 138
Query: 70 INEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGK 129
+ K+ + KE ++ S +ED + + E++ +KK
Sbjct: 139 VGPASILKEVEDKESEGEEEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKS 198
Query: 130 HHKKEKKKRKKEKHSSTPNSSEFSRK 155
+ + K R SS+ +SS S +
Sbjct: 199 NRRSRSKSRSSHSRSSSRSSSPSSSR 224
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.300 0.118 0.311
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,810,682
Number of Sequences: 37866
Number of extensions: 372344
Number of successful extensions: 35312
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1653
Number of HSP's successfully gapped in prelim test: 782
Number of HSP's that attempted gapping in prelim test: 5033
Number of HSP's gapped (non-prelim): 15380
length of query: 155
length of database: 18,247,518
effective HSP length: 93
effective length of query: 62
effective length of database: 14,725,980
effective search space: 913010760
effective search space used: 913010760
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.