CNGA1 13581

Name: CNGA1	Sequence: fasta or formatted (759aa)		NCBI GI: 217035093
Description: cyclic nucleotide gated channel alpha 1 isoform 1		Referenced in: Calcium and TRP Cation Channels Photoreceptors and Related Functions
Other entries for this name: alt prot [690aa] cyclic nucleotide gated channel alpha 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 36 2 C cysteine 1.2 9 1 D aspartate 6.6 50 3 E glutamate 7.9 60 3 F phenylalanine 4.5 34 2 G glycine 5.1 39 2 H histidine 1.1 8 2 I isoleucine 7.2 55 3 K lysine 9.6 73 6 L leucine 9.6 73 2 M methionine 2.8 21 1 N asparagine 5.0 38 2 P proline 3.7 28 3 Q glutamine 2.9 22 2 R arginine 4.3 33 2 S serine 8.0 61 2 T threonine 4.3 33 2 V valine 6.1 46 3 W tryptophan 1.2 9 1 Y tyrosine 4.1 31 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cyclic nucleotide gated channel alpha 1 isoform 1 [... CNGA1 0.909 cyclic nucleotide gated channel alpha 1 isoform 2 [H... CNGA3 0.553 cyclic nucleotide gated channel alpha 3 isoform 1 [Ho... CNGA3 0.552 cyclic nucleotide gated channel alpha 3 isoform 2 [... CNGA2 0.515 cyclic nucleotide gated channel alpha 2 CNGA4 0.384 cyclic nucleotide gated channel alpha 4 CNGB1 0.194 cyclic nucleotide gated channel beta 1 isoform a [H... CNGB3 0.187 cyclic nucleotide gated channel beta 3 HCN1 0.103 hyperpolarization activated cyclic nucleotide-gated... HCN4 0.101 hyperpolarization activated cyclic nucleotide-gated p... HCN2 0.095 hyperpolarization activated cyclic nucleotide-gated... HCN3 0.093 hyperpolarization activated cyclic nucleotide-gated ... KCNH7 0.092 potassium voltage-gated channel, subfamily H, member... KCNH6 0.089 potassium voltage-gated channel, subfamily H, member... KCNH8 0.087 potassium voltage-gated channel, subfamily H, member... KCNH2 0.083 voltage-gated potassium channel, subfamily H, member... KCNH2 0.083 voltage-gated potassium channel, subfamily H, member ... KCNH4 0.081 potassium voltage-gated channel, subfamily H, member ... KCNH1 0.081 potassium voltage-gated channel, subfamily H, member ... KCNH5 0.080 potassium voltage-gated channel, subfamily H, member... KCNH5 0.079 potassium voltage-gated channel, subfamily H, member... KCNH6 0.077 potassium voltage-gated channel, subfamily H, member... KCNH1 0.075 potassium voltage-gated channel, subfamily H, member... KCNH3 0.075 potassium voltage-gated channel, subfamily H (eag-re... KCNH2 0.071 voltage-gated potassium channel, subfamily H, member... KCNH5 0.069 potassium voltage-gated channel, subfamily H, member... KCNH7 0.052 potassium voltage-gated channel, subfamily H, member... LOC100294364 0.024 PREDICTED: hypothetical protein LOC100294088 0.023 PREDICTED: hypothetical protein, partial C16orf89 0.022 hypothetical protein LOC146556 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.