CNGA1 35177

Name: CNGA1	Sequence: fasta or formatted (690aa)		NCBI GI: 71143141
Description: cyclic nucleotide gated channel alpha 1 isoform 2		Referenced in: Calcium and TRP Cation Channels Photoreceptors and Related Functions
Other entries for this name: alt prot [759aa] cyclic nucleotide gated channel alpha 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 31 2 C cysteine 1.0 7 1 D aspartate 6.7 46 3 E glutamate 8.1 56 3 F phenylalanine 4.3 30 2 G glycine 4.9 34 2 H histidine 0.6 4 1 I isoleucine 7.4 51 3 K lysine 10.6 73 6 L leucine 9.3 64 2 M methionine 2.8 19 1 N asparagine 5.5 38 2 P proline 3.6 25 3 Q glutamine 2.8 19 2 R arginine 4.5 31 2 S serine 7.0 48 2 T threonine 4.5 31 2 V valine 6.2 43 3 W tryptophan 1.3 9 1 Y tyrosine 4.5 31 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cyclic nucleotide gated channel alpha 1 isoform 2 [H... CNGA1 1.000 cyclic nucleotide gated channel alpha 1 isoform 1 [... CNGA3 0.608 cyclic nucleotide gated channel alpha 3 isoform 1 [Ho... CNGA3 0.608 cyclic nucleotide gated channel alpha 3 isoform 2 [... CNGA2 0.566 cyclic nucleotide gated channel alpha 2 CNGA4 0.422 cyclic nucleotide gated channel alpha 4 CNGB1 0.213 cyclic nucleotide gated channel beta 1 isoform a [H... CNGB3 0.205 cyclic nucleotide gated channel beta 3 HCN1 0.113 hyperpolarization activated cyclic nucleotide-gated... HCN4 0.111 hyperpolarization activated cyclic nucleotide-gated p... HCN2 0.104 hyperpolarization activated cyclic nucleotide-gated... HCN3 0.102 hyperpolarization activated cyclic nucleotide-gated ... KCNH7 0.101 potassium voltage-gated channel, subfamily H, member... KCNH6 0.098 potassium voltage-gated channel, subfamily H, member... KCNH8 0.095 potassium voltage-gated channel, subfamily H, member... KCNH2 0.091 voltage-gated potassium channel, subfamily H, member... KCNH2 0.091 voltage-gated potassium channel, subfamily H, member ... KCNH4 0.089 potassium voltage-gated channel, subfamily H, member ... KCNH1 0.089 potassium voltage-gated channel, subfamily H, member ... KCNH5 0.088 potassium voltage-gated channel, subfamily H, member... KCNH5 0.086 potassium voltage-gated channel, subfamily H, member... KCNH6 0.084 potassium voltage-gated channel, subfamily H, member... KCNH1 0.083 potassium voltage-gated channel, subfamily H, member... KCNH3 0.083 potassium voltage-gated channel, subfamily H (eag-re... KCNH2 0.078 voltage-gated potassium channel, subfamily H, member... KCNH5 0.075 potassium voltage-gated channel, subfamily H, member... KCNH7 0.058 potassium voltage-gated channel, subfamily H, member... LOC100294364 0.026 PREDICTED: hypothetical protein LOC100294088 0.025 PREDICTED: hypothetical protein, partial UPF2 0.024 UPF2 regulator of nonsense transcripts homolog [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.