NKAP 7062

Name: NKAP	Sequence: fasta or formatted (415aa)		NCBI GI: 168229156
Description: NFKB activating protein		Referenced in: NF-kappaB Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 23 2 C cysteine 0.5 2 1 D aspartate 5.3 22 2 E glutamate 10.4 43 3 F phenylalanine 1.2 5 1 G glycine 6.3 26 2 H histidine 1.7 7 1 I isoleucine 1.9 8 1 K lysine 13.5 56 4 L leucine 4.6 19 2 M methionine 1.2 5 1 N asparagine 2.2 9 1 P proline 5.8 24 1 Q glutamine 1.9 8 1 R arginine 12.3 51 3 S serine 17.6 73 3 T threonine 2.7 11 2 V valine 1.9 8 1 W tryptophan 0.7 3 1 Y tyrosine 2.9 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 NFKB activating protein NKAPL 0.535 NFKB activating protein-like SFRS12 0.081 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.081 splicing factor, arginine/serine-rich 12 isoform b [... PRPF38B 0.079 PRP38 pre-mRNA processing factor 38 (yeast) domain ... SFRS4 0.068 splicing factor, arginine/serine-rich 4 LOC100170229 0.066 hypothetical protein LOC100170229 FAM133B 0.064 hypothetical protein LOC257415 isoform 2 FAM133B 0.064 hypothetical protein LOC257415 isoform 1 C11orf57 0.061 hypothetical protein LOC55216 isoform a C11orf57 0.061 hypothetical protein LOC55216 isoform a LOC100133599 0.061 PREDICTED: hypothetical protein C11orf57 0.061 hypothetical protein LOC55216 isoform b LOC100133599 0.060 PREDICTED: hypothetical protein PPIG 0.059 peptidylprolyl isomerase G ATRX 0.059 transcriptional regulator ATRX isoform 2 ATRX 0.059 transcriptional regulator ATRX isoform 1 SFRS11 0.059 splicing factor, arginine/serine-rich 11 LOC100294088 0.056 PREDICTED: hypothetical protein, partial NKTR 0.055 natural killer-tumor recognition sequence FAM133A 0.055 hypothetical protein LOC286499 TOPORS 0.054 topoisomerase I binding, arginine/serine-rich SFRS18 0.054 splicing factor, arginine/serine-rich 130 SFRS18 0.054 splicing factor, arginine/serine-rich 130 SFRS12IP1 0.053 P18SRP protein CYLC2 0.051 cylicin 2 GPATCH8 0.050 G patch domain containing 8 ARL6IP4 0.049 SRp25 nuclear protein isoform 3 CIR1 0.049 CBF1 interacting corepressor SFRS16 0.048 splicing factor, arginine/serine-rich 16 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.