HOXB1 23920

Name: HOXB1	Sequence: fasta or formatted (301aa)		NCBI GI: 24497526
Description: homeobox B1		Referenced in: HOX Genes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 29 2 C cysteine 1.7 5 1 D aspartate 3.0 9 1 E glutamate 6.3 19 2 F phenylalanine 3.7 11 1 G glycine 9.6 29 3 H histidine 1.3 4 1 I isoleucine 0.7 2 1 K lysine 4.0 12 2 L leucine 5.3 16 2 M methionine 1.3 4 1 N asparagine 3.7 11 1 P proline 13.0 39 2 Q glutamine 5.0 15 2 R arginine 5.0 15 2 S serine 12.3 37 2 T threonine 5.6 17 2 V valine 2.7 8 1 W tryptophan 0.7 2 1 Y tyrosine 5.6 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeobox B1 HOXA1 0.301 homeobox A1 isoform a HOXD1 0.211 homeobox D1 HOXD4 0.140 homeobox D4 HOXB2 0.135 homeobox B2 HOXD3 0.130 homeobox D3 HOXA3 0.127 homeobox A3 isoform a HOXA3 0.127 homeobox A3 isoform a HOXA4 0.127 homeobox A4 MNX1 0.124 homeo box HB9 HOXC4 0.120 homeobox C4 HOXC4 0.120 homeobox C4 HOXB3 0.120 homeobox B3 CDX2 0.119 caudal type homeobox 2 CDX1 0.119 caudal type homeobox 1 HOXA5 0.117 homeobox A5 HOXB4 0.114 homeobox B4 HOXA2 0.110 homeobox A2 HOXA10 0.110 homeobox A10 isoform a HOXA3 0.109 homeobox A3 isoform b HOXA7 0.105 homeobox A7 HOXB6 0.105 homeobox B6 HOXB7 0.102 homeobox B7 HOXD8 0.099 homeobox D8 HOXB9 0.097 homeobox B9 HOXC5 0.094 homeobox C5 HOXD9 0.094 homeobox D9 HOXB5 0.094 homeobox B5 PDX1 0.092 pancreatic and duodenal homeobox 1 GSX1 0.091 GS homeobox 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.