HOXA5 23918

Name: HOXA5	Sequence: fasta or formatted (270aa)		NCBI GI: 24497517
Description: homeobox A5		Referenced in: HOX Genes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.1 30 3 C cysteine 1.1 3 1 D aspartate 3.7 10 1 E glutamate 5.2 14 2 F phenylalanine 3.0 8 1 G glycine 9.3 25 2 H histidine 4.4 12 2 I isoleucine 3.0 8 1 K lysine 3.7 10 2 L leucine 4.1 11 1 M methionine 2.6 7 1 N asparagine 3.7 10 1 P proline 7.4 20 2 Q glutamine 4.1 11 1 R arginine 7.8 21 4 S serine 15.2 41 2 T threonine 3.0 8 1 V valine 1.9 5 1 W tryptophan 1.1 3 1 Y tyrosine 4.8 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeobox A5 HOXB5 0.545 homeobox B5 HOXC5 0.301 homeobox C5 HOXB4 0.251 homeobox B4 HOXC4 0.243 homeobox C4 HOXC4 0.243 homeobox C4 HOXA4 0.238 homeobox A4 HOXD4 0.234 homeobox D4 HOXB6 0.223 homeobox B6 HOXC6 0.219 homeobox C6 isoform 1 HOXA6 0.212 homeobox A6 HOXC6 0.210 homeobox C6 isoform 2 HOXA7 0.208 homeobox A7 HOXB7 0.199 homeobox B7 HOXD8 0.182 homeobox D8 HOXB8 0.169 homeobox B8 HOXA3 0.165 homeobox A3 isoform a HOXA3 0.165 homeobox A3 isoform a HOXD3 0.163 homeobox D3 HOXD9 0.154 homeobox D9 HOXC8 0.154 homeobox C8 HOXB3 0.148 homeobox B3 HOXA3 0.142 homeobox A3 isoform b HOXA2 0.140 homeobox A2 HOXA10 0.139 homeobox A10 isoform a PDX1 0.137 pancreatic and duodenal homeobox 1 CDX4 0.135 caudal type homeobox 4 HOXB1 0.133 homeobox B1 HOXC10 0.129 homeobox C10 HOXC9 0.129 homeobox C9 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.