HOXC5 1065

Name: HOXC5	Sequence: fasta or formatted (222aa)		NCBI GI: 11321638
Description: homeobox C5		Referenced in: HOX Genes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.3 25 4 C cysteine 1.8 4 1 D aspartate 2.7 6 1 E glutamate 6.3 14 2 F phenylalanine 2.3 5 1 G glycine 5.4 12 2 H histidine 2.7 6 1 I isoleucine 3.6 8 1 K lysine 6.3 14 2 L leucine 5.9 13 1 M methionine 3.6 8 1 N asparagine 5.4 12 2 P proline 9.0 20 3 Q glutamine 5.4 12 1 R arginine 7.7 17 4 S serine 9.0 20 2 T threonine 4.1 9 1 V valine 1.4 3 1 W tryptophan 1.4 3 1 Y tyrosine 5.0 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeobox C5 HOXA5 0.368 homeobox A5 HOXB5 0.346 homeobox B5 HOXD4 0.268 homeobox D4 HOXA4 0.261 homeobox A4 HOXC4 0.254 homeobox C4 HOXC4 0.254 homeobox C4 HOXB4 0.249 homeobox B4 HOXB6 0.233 homeobox B6 HOXC6 0.229 homeobox C6 isoform 2 HOXC6 0.229 homeobox C6 isoform 1 HOXA6 0.227 homeobox A6 HOXB7 0.227 homeobox B7 HOXA7 0.224 homeobox A7 HOXD8 0.195 homeobox D8 HOXA3 0.188 homeobox A3 isoform a HOXA3 0.188 homeobox A3 isoform a HOXB8 0.185 homeobox B8 HOXD3 0.178 homeobox D3 HOXC8 0.178 homeobox C8 HOXD9 0.172 homeobox D9 HOXB9 0.165 homeobox B9 HOXC9 0.165 homeobox C9 HOXB3 0.165 homeobox B3 HOXA3 0.162 homeobox A3 isoform b PDX1 0.162 pancreatic and duodenal homeobox 1 HOXA9 0.156 homeobox A9 HOXA2 0.156 homeobox A2 HOXD1 0.156 homeobox D1 CDX1 0.151 caudal type homeobox 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.