HOXB5 28845

Name: HOXB5	Sequence: fasta or formatted (269aa)		NCBI GI: 4504469
Description: homeobox B5		Referenced in: HOX Genes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.2 30 2 C cysteine 1.1 3 1 D aspartate 3.3 9 1 E glutamate 5.6 15 2 F phenylalanine 4.1 11 1 G glycine 5.9 16 1 H histidine 2.6 7 1 I isoleucine 2.6 7 1 K lysine 3.7 10 2 L leucine 5.9 16 2 M methionine 3.0 8 1 N asparagine 4.1 11 1 P proline 7.1 19 1 Q glutamine 4.5 12 1 R arginine 7.1 19 4 S serine 17.1 46 3 T threonine 4.8 13 1 V valine 1.1 3 1 W tryptophan 1.1 3 1 Y tyrosine 4.1 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeobox B5 HOXA5 0.561 homeobox A5 HOXC5 0.291 homeobox C5 HOXA4 0.245 homeobox A4 HOXC4 0.245 homeobox C4 HOXC4 0.245 homeobox C4 HOXB4 0.233 homeobox B4 HOXB6 0.229 homeobox B6 HOXD4 0.222 homeobox D4 HOXA7 0.208 homeobox A7 HOXA6 0.208 homeobox A6 HOXB7 0.200 homeobox B7 HOXC6 0.198 homeobox C6 isoform 2 HOXC6 0.198 homeobox C6 isoform 1 HOXA3 0.197 homeobox A3 isoform a HOXA3 0.197 homeobox A3 isoform a HOXB8 0.183 homeobox B8 HOXC8 0.171 homeobox C8 HOXD8 0.164 homeobox D8 HOXD3 0.158 homeobox D3 HOXA10 0.148 homeobox A10 isoform a HOXB3 0.148 homeobox B3 HOXA3 0.145 homeobox A3 isoform b HOXA2 0.137 homeobox A2 PDX1 0.135 pancreatic and duodenal homeobox 1 HOXD9 0.135 homeobox D9 HOXD10 0.133 homeobox D10 CDX2 0.133 caudal type homeobox 2 HOXB2 0.129 homeobox B2 CDX1 0.129 caudal type homeobox 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.