HOXD3 11654

Name: HOXD3	Sequence: fasta or formatted (432aa)		NCBI GI: 19923391
Description: homeobox D3		Referenced in: HOX Genes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.2 44 3 C cysteine 2.1 9 1 D aspartate 2.1 9 1 E glutamate 4.4 19 1 F phenylalanine 2.5 11 1 G glycine 9.7 42 5 H histidine 3.5 15 3 I isoleucine 1.6 7 1 K lysine 5.1 22 2 L leucine 6.7 29 2 M methionine 2.1 9 1 N asparagine 4.2 18 1 P proline 13.7 59 6 Q glutamine 6.0 26 2 R arginine 3.5 15 2 S serine 11.1 48 4 T threonine 4.2 18 2 V valine 2.5 11 1 W tryptophan 0.5 2 1 Y tyrosine 4.4 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeobox D3 HOXA3 0.425 homeobox A3 isoform a HOXA3 0.425 homeobox A3 isoform a HOXB3 0.417 homeobox B3 HOXA3 0.328 homeobox A3 isoform b HOXA2 0.119 homeobox A2 HOXB2 0.114 homeobox B2 HOXD4 0.113 homeobox D4 HOXB4 0.109 homeobox B4 HOXA4 0.101 homeobox A4 PDX1 0.098 pancreatic and duodenal homeobox 1 HOXA5 0.098 homeobox A5 HOXC4 0.098 homeobox C4 HOXC4 0.098 homeobox C4 HOXD1 0.096 homeobox D1 HOXA6 0.095 homeobox A6 HOXB5 0.093 homeobox B5 HOXB1 0.089 homeobox B1 HOXC5 0.088 homeobox C5 HOXD8 0.086 homeobox D8 HOXA7 0.085 homeobox A7 HOXB6 0.084 homeobox B6 GSX1 0.080 GS homeobox 1 HOXB7 0.080 homeobox B7 NKX1-1 0.079 PREDICTED: HPX-153 homeobox HOXA1 0.079 homeobox A1 isoform a CDX1 0.079 caudal type homeobox 1 HOXA10 0.078 homeobox A10 isoform a NKX1-1 0.078 PREDICTED: NK1 homeobox 1 CDX2 0.078 caudal type homeobox 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.