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Search of human proteins with 239752182
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752182 PREDICTED: hypothetical protein [Homo sapiens]
(147 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757697 PREDICTED: hypothetical protein XP_002345524 [Homo ... 291 1e-79
gi|239752182 PREDICTED: hypothetical protein [Homo sapiens] 291 1e-79
gi|239746705 PREDICTED: hypothetical protein XP_002343815 [Homo ... 240 4e-64
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 46 1e-05
gi|148746211 NK2 transcription factor related, locus 3 [Homo sap... 41 4e-04
gi|33620755 YEATS domain containing 2 [Homo sapiens] 39 0.001
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 39 0.002
gi|150378478 PR domain containing 8 [Homo sapiens] 38 0.003
gi|150378439 PR domain containing 8 [Homo sapiens] 38 0.003
gi|122937424 one cut homeobox 3 [Homo sapiens] 38 0.003
gi|126090909 engrailed homeobox 1 [Homo sapiens] 37 0.005
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 37 0.006
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 37 0.006
gi|197313672 carnitine deficiency-associated gene expressed in v... 37 0.006
gi|8923710 carnitine deficiency-associated gene expressed in ven... 37 0.006
gi|109148552 keratin 3 [Homo sapiens] 37 0.006
gi|238859557 regulatory factor X1 [Homo sapiens] 37 0.008
gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo ... 36 0.013
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 35 0.023
gi|239749560 PREDICTED: hypothetical protein XP_002347086 [Homo ... 35 0.023
gi|239743710 PREDICTED: hypothetical protein XP_002342931 [Homo ... 35 0.023
gi|109255251 loricrin [Homo sapiens] 35 0.023
gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo s... 35 0.023
gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo s... 35 0.023
gi|34452711 Ca2+-dependent secretion activator isoform 3 [Homo s... 35 0.023
gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens] 35 0.023
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 35 0.023
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 35 0.023
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 35 0.023
gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo ... 35 0.029
>gi|239757697 PREDICTED: hypothetical protein XP_002345524 [Homo
sapiens]
Length = 147
Score = 291 bits (746), Expect = 1e-79
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MAINGLQGERSSREKEYLDSGKESLTPTGSGYTILSKTPSSSIVISSSALRGLRPSGALF 60
MAINGLQGERSSREKEYLDSGKESLTPTGSGYTILSKTPSSSIVISSSALRGLRPSGALF
Sbjct: 1 MAINGLQGERSSREKEYLDSGKESLTPTGSGYTILSKTPSSSIVISSSALRGLRPSGALF 60
Query: 61 TRVCSAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEG 120
TRVCSAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEG
Sbjct: 61 TRVCSAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEG 120
Query: 121 LGVGGSQEQLAGLQLRLKAGHKWDPQP 147
LGVGGSQEQLAGLQLRLKAGHKWDPQP
Sbjct: 121 LGVGGSQEQLAGLQLRLKAGHKWDPQP 147
>gi|239752182 PREDICTED: hypothetical protein [Homo sapiens]
Length = 147
Score = 291 bits (746), Expect = 1e-79
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MAINGLQGERSSREKEYLDSGKESLTPTGSGYTILSKTPSSSIVISSSALRGLRPSGALF 60
MAINGLQGERSSREKEYLDSGKESLTPTGSGYTILSKTPSSSIVISSSALRGLRPSGALF
Sbjct: 1 MAINGLQGERSSREKEYLDSGKESLTPTGSGYTILSKTPSSSIVISSSALRGLRPSGALF 60
Query: 61 TRVCSAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEG 120
TRVCSAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEG
Sbjct: 61 TRVCSAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEG 120
Query: 121 LGVGGSQEQLAGLQLRLKAGHKWDPQP 147
LGVGGSQEQLAGLQLRLKAGHKWDPQP
Sbjct: 121 LGVGGSQEQLAGLQLRLKAGHKWDPQP 147
>gi|239746705 PREDICTED: hypothetical protein XP_002343815 [Homo
sapiens]
Length = 411
Score = 240 bits (612), Expect = 4e-64
Identities = 120/121 (99%), Positives = 120/121 (99%)
Query: 27 PTGSGYTILSKTPSSSIVISSSALRGLRPSGALFTRVCSAPLAASTAAARGSAGSGSICR 86
PTGSGYTILSKTPSSSIVISSSALRGLRPSGALFTRVCSAPLAASTAAARGSAGS SICR
Sbjct: 291 PTGSGYTILSKTPSSSIVISSSALRGLRPSGALFTRVCSAPLAASTAAARGSAGSASICR 350
Query: 87 TSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVGGSQEQLAGLQLRLKAGHKWDPQ 146
TSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVGGSQEQLAGLQLRLKAGHKWDPQ
Sbjct: 351 TSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVGGSQEQLAGLQLRLKAGHKWDPQ 410
Query: 147 P 147
P
Sbjct: 411 P 411
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 46.2 bits (108), Expect = 1e-05
Identities = 42/122 (34%), Positives = 53/122 (43%), Gaps = 17/122 (13%)
Query: 10 RSSREKEYLDSGKESLTPTGSGYTILSKTPSSSIVISSSALRGLRPSGALFTRVCSAPLA 69
+ S SG ES TP G +PS+ SS+ L P+ A +A A
Sbjct: 420 QGSESSPAASSGYESSTPPG------LVSPSAEPQSSSN----LSPAAAAAAAAAAAAAA 469
Query: 70 ASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVGGSQEQ 129
A +A RG GSGS A GG+GGG+ +G G G GG G G G G G
Sbjct: 470 AVSAVHRG-GGSGS---GGAGGGSGGGSGSGGGGGGAGGGGGGSSGG---GSGTAGGHSG 522
Query: 130 LA 131
L+
Sbjct: 523 LS 524
Score = 38.5 bits (88), Expect = 0.002
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Query: 26 TPTGSGYTILSKTPSSSIVISSSALRGLRPSGALFTRVCSAPLAASTAAARGSAGSGSIC 85
+P GS +P++S SS GL A + AA+ AAA +A + ++
Sbjct: 418 SPQGS-----ESSPAASSGYESSTPPGLVSPSAEPQSSSNLSPAAAAAAAAAAAAAAAVS 472
Query: 86 RTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVGG 125
GG+G G A G G G GG G G G GG
Sbjct: 473 AVHRGGGSGSGGAGGGSGGGSGSGGGG------GGAGGGG 506
>gi|148746211 NK2 transcription factor related, locus 3 [Homo
sapiens]
Length = 364
Score = 40.8 bits (94), Expect = 4e-04
Identities = 35/115 (30%), Positives = 46/115 (40%), Gaps = 11/115 (9%)
Query: 21 GKESLTPTGSGYTILSKTPSSSIVISSSALRGLRPSGALFTRVCSAPLAASTAAARGSAG 80
GK +TP+ Y +S+ +S G S A +A AA+ AAA +
Sbjct: 235 GKPCVTPSAQAYGAPYSVGASAYSYNSFPAYGYGNSAA------AAAAAAAAAAAAAAYS 288
Query: 81 SGSICRTSAAGGAGGGAAAGAEGRW-----VGHGGPGILGSLKEGLGVGGSQEQL 130
S C A GG GGG + A GGP + S G G GGS + L
Sbjct: 289 SSYGCAYPAGGGGGGGGTSAATTAMQPACSAAGGGPFVNVSNLGGFGSGGSAQPL 343
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 39.3 bits (90), Expect = 0.001
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Query: 53 LRPSGALFTRVCSAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPG 112
L P GA+ +A L + +AA+ GS G GG GGG + G G GG
Sbjct: 776 LIPQGAILRATNNANLQSGSAASGGSGAGGG------GGGGGGGGSGSGGGGSTGGGGGT 829
Query: 113 ILGSLKEGLGVGGSQEQLAGLQLRLK 138
G + G GG + L LK
Sbjct: 830 AGGGTQSTAGPGGISQHLTYTSYILK 855
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 38.9 bits (89), Expect = 0.002
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 40 SSSIVISSSALRGLRPSGALFTRVCSAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAA 99
+++ SS+A G PSG + CS S+ +A +A + + S GG GGG
Sbjct: 365 AAAAAASSAAAAGAPPSGG--SAPCSCLSCHSSQSAAAAAAAAAAALGSRGGGGGGGGGG 422
Query: 100 GAEGRWVGHGGPGILG 115
G G G GG G
Sbjct: 423 GGGGGGAGAGGGSDFG 438
Score = 37.7 bits (86), Expect = 0.003
Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 48 SALRGLRPSGALFTRVCSAPLAASTAAARGSAGSGSI-------CRTS-AAGGAGGGAAA 99
+A GL + + +A AAS+AAA G+ SG C +S +A A AAA
Sbjct: 348 AAAAGLNSAASAAAAAAAAAAAASSAAAAGAPPSGGSAPCSCLSCHSSQSAAAAAAAAAA 407
Query: 100 GAEGRWVGHGGPGILGSLKEGLGVGGSQE 128
R G GG G G G G GG +
Sbjct: 408 ALGSRGGGGGGGGGGGGGGGGAGAGGGSD 436
Score = 30.8 bits (68), Expect = 0.42
Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Query: 8 GERSSREKEYLDSGKESLTPTGSGYTILSKTPSSSIVISSSALRGLRPSGALFTRVCSAP 67
G S+ E + + P SS + + SALR GA + +
Sbjct: 83 GSESTVSSEISSAAESRKKPGHYSEAAAEADMSSDVEVGCSALRSPGGLGAAQLKENNGK 142
Query: 68 LAASTAAARG----SAGSGSICRTSAAGGAGGGAAAGAEG 103
A + +A G ++GSG +GG+GG AA G G
Sbjct: 143 GYAESGSAAGTTTSASGSGLGSLHGGSGGSGGSAALGGSG 182
>gi|150378478 PR domain containing 8 [Homo sapiens]
Length = 689
Score = 37.7 bits (86), Expect = 0.003
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 36 SKTPSSSIVISSSALRGLRPSGALFTRV-----------CSAPLAASTAAARGSAGSGSI 84
S TP+++ + + L RP G L +R+ S P S + G G+G+
Sbjct: 422 SSTPAAASPVGAEKLLAPRPGGPLPSRLEGGSPARGSAFTSVPQLGSAGSTSGGGGTGA- 480
Query: 85 CRTSAAGGAGGGAAAGAEGR 104
AAGGAGGG A ++ R
Sbjct: 481 ---GAAGGAGGGQGAASDER 497
>gi|150378439 PR domain containing 8 [Homo sapiens]
Length = 689
Score = 37.7 bits (86), Expect = 0.003
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 36 SKTPSSSIVISSSALRGLRPSGALFTRV-----------CSAPLAASTAAARGSAGSGSI 84
S TP+++ + + L RP G L +R+ S P S + G G+G+
Sbjct: 422 SSTPAAASPVGAEKLLAPRPGGPLPSRLEGGSPARGSAFTSVPQLGSAGSTSGGGGTGA- 480
Query: 85 CRTSAAGGAGGGAAAGAEGR 104
AAGGAGGG A ++ R
Sbjct: 481 ---GAAGGAGGGQGAASDER 497
>gi|122937424 one cut homeobox 3 [Homo sapiens]
Length = 494
Score = 37.7 bits (86), Expect = 0.003
Identities = 32/79 (40%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Query: 55 PSGALFTRVCSAPLAASTAAARGSAGSGSICRTSAAG---GAGGGAAAGAEGRWVGHGGP 111
P AL R A LA G GSG SAAG GG AAAGA G G GGP
Sbjct: 247 PHAALLGRAEDA-LARGLPGGGGGTGSGGAGSGSAAGLLAPLGGLAAAGAHGPHGGGGGP 305
Query: 112 GILGSLKEGLGVGGSQEQL 130
G G G G + E++
Sbjct: 306 GGSGG---GPSAGAAAEEI 321
Score = 31.6 bits (70), Expect = 0.25
Identities = 25/84 (29%), Positives = 29/84 (34%), Gaps = 11/84 (13%)
Query: 62 RVCSAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLK--- 118
R +A A R +G GG GGG A GA G GG G L
Sbjct: 29 RSAAAQHRGLVAPGRPGLVAGMASLLDGGGGGGGGGAGGAGGAGSAGGGADFRGELAGPL 88
Query: 119 --------EGLGVGGSQEQLAGLQ 134
E G+GG+ L LQ
Sbjct: 89 HPAMGMACEAPGLGGTYTTLTPLQ 112
>gi|126090909 engrailed homeobox 1 [Homo sapiens]
Length = 392
Score = 37.4 bits (85), Expect = 0.005
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 10/131 (7%)
Query: 8 GERSSREKEYLDSGKESLTPTGS---GYTILSKTPSSSIVISSSALRGLRPSGALFTRVC 64
G R R++ +G++ + P G+ G L P ++ + +GA
Sbjct: 139 GGRVERDRGQTAAGRDPVHPLGTRAPGAASLLCAPDANCGPPDGSQPAAAGAGASKAGNP 198
Query: 65 SAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEG----RWVGHGGPGIL--GSLK 118
+A AA+ AAA +A + + + S GG G G AG+ G ++ HG P IL GS
Sbjct: 199 AAA-AAAAAAAVAAAAAAAAAKPSDTGGGGSGGGAGSPGAQGTKYPEHGNPAILLMGSAN 257
Query: 119 EGLGVGGSQEQ 129
G V +Q
Sbjct: 258 GGPVVKTDSQQ 268
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 37.0 bits (84), Expect = 0.006
Identities = 25/55 (45%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 72 TAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVGGS 126
TA A G+AGS + AGGAGGG A A G G GG G G+ G GG+
Sbjct: 196 TAGAPGAAGSAA-ASAGGAGGAGGGGPASAGGGGGGGGGGGGGGA----AGAGGA 245
Score = 35.4 bits (80), Expect = 0.017
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 12/75 (16%)
Query: 69 AASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVGG--- 125
A S AA+ G AG ++AGG GGG G G G G G+L GG
Sbjct: 203 AGSAAASAGGAGGAGGGGPASAGGGGGGGGGGG-----GGGAAGAGGALHPHHAAGGLHF 257
Query: 126 ----SQEQLAGLQLR 136
S EQL + +R
Sbjct: 258 DDRFSDEQLVTMSVR 272
>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform a [Homo sapiens]
Length = 403
Score = 37.0 bits (84), Expect = 0.006
Identities = 25/55 (45%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 72 TAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVGGS 126
TA A G+AGS + AGGAGGG A A G G GG G G+ G GG+
Sbjct: 196 TAGAPGAAGSAA-ASAGGAGGAGGGGPASAGGGGGGGGGGGGGGA----AGAGGA 245
Score = 35.4 bits (80), Expect = 0.017
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 12/75 (16%)
Query: 69 AASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVGG--- 125
A S AA+ G AG ++AGG GGG G G G G G+L GG
Sbjct: 203 AGSAAASAGGAGGAGGGGPASAGGGGGGGGGGG-----GGGAAGAGGALHPHHAAGGLHF 257
Query: 126 ----SQEQLAGLQLR 136
S EQL + +R
Sbjct: 258 DDRFSDEQLVTMSVR 272
>gi|197313672 carnitine deficiency-associated gene expressed in
ventricle 3 isoform a [Homo sapiens]
Length = 213
Score = 37.0 bits (84), Expect = 0.006
Identities = 25/52 (48%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 69 AASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEG 120
AAS A A GSAG S AAG AGGGA AG G GG G+ G
Sbjct: 28 AASAAGAAGSAGGSS----GAAGAAGGGAGAGTR---PGDGGTASAGAAGPG 72
>gi|8923710 carnitine deficiency-associated gene expressed in
ventricle 3 isoform b [Homo sapiens]
Length = 258
Score = 37.0 bits (84), Expect = 0.006
Identities = 25/52 (48%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 69 AASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEG 120
AAS A A GSAG S AAG AGGGA AG G GG G+ G
Sbjct: 28 AASAAGAAGSAGGSS----GAAGAAGGGAGAGTR---PGDGGTASAGAAGPG 72
>gi|109148552 keratin 3 [Homo sapiens]
Length = 628
Score = 37.0 bits (84), Expect = 0.006
Identities = 22/49 (44%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 77 GSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVGG 125
G G+G GGAGG G G G GGPG LGS G G GG
Sbjct: 118 GFGGAGGFGGAGGFGGAGGFGGPGGFGGSGGFGGPGSLGS-PGGFGPGG 165
Score = 35.0 bits (79), Expect = 0.023
Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 12/84 (14%)
Query: 50 LRGLRPSGALFTRVCSAPLAASTAAARGSAGSGSICRTSAAGGAGGG-AAAGAEGRWVGH 108
+ G PS + V S+ +AS G G G GG GGG +A G G G
Sbjct: 513 MSGECPSAVSISVVSSSTTSASAGGYGGGYGGGM------GGGLGGGFSAGGGSGSGFGR 566
Query: 109 GGPGILGSLKEGLGVGGSQEQLAG 132
GG G +G G GG +G
Sbjct: 567 GGGGGIGG-----GFGGGSSGFSG 585
Score = 32.0 bits (71), Expect = 0.19
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 65 SAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVG--HGGPGILGSLKEGLG 122
S +AA + A G G S C + AGG GGG +G G + G GG G+ G G
Sbjct: 67 SISVAAGGSRAGGFGGGRSSC--AFAGGYGGGFGSGYGGGFGGGFGGGRGMGGGFGGAGG 124
Query: 123 VGGS 126
GG+
Sbjct: 125 FGGA 128
Score = 30.8 bits (68), Expect = 0.42
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Query: 29 GSGYTILSKTPSS---SIVISSSALRGLRPSGALFTRVCSAPLAASTAAARGSAGSGSIC 85
G Y + + PS+ S+V SS+ G + L +A GSGS
Sbjct: 508 GEEYRMSGECPSAVSISVVSSSTTSASAGGYGGGYGGGMGGGLGGGFSAG---GGSGSGF 564
Query: 86 RTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVGG 125
GG GGG G+ G + G G G + + G+ GG
Sbjct: 565 GRGGGGGIGGGFGGGSSG-FSGGSGFGSISGARYGVSGGG 603
Score = 27.7 bits (60), Expect = 3.6
Identities = 16/51 (31%), Positives = 21/51 (41%)
Query: 69 AASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKE 119
A A G G+G GG+GG G+ G G G G G ++E
Sbjct: 122 AGGFGGAGGFGGAGGFGGPGGFGGSGGFGGPGSLGSPGGFGPGGFPGGIQE 172
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 36.6 bits (83), Expect = 0.008
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 38 TPSSSIVISSSALRGLRPSGALFTRVCSAPLAASTAAARGSAGSGSICRTSAAGGAGGGA 97
TP++S ++SS + SG+ +V ++ + A+ S G GS GG GGG
Sbjct: 343 TPATSQAVASSGSMPMYVSGS---QVVASSTSTGAGASNSSGGGGS----GGGGGGGGGG 395
Query: 98 AAGAEGRWVGHGGPGILGSLKEGLGVGGSQEQ 129
G G G GG G + +G + GS Q
Sbjct: 396 GGGGSGS-TGGGGSGAGTYVIQGGYMLGSASQ 426
>gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo
sapiens]
Length = 284
Score = 35.8 bits (81), Expect = 0.013
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 55 PSGALFTRVCSAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGG 110
P+ A T P A A RG +G R+SA GG GGG G G G GG
Sbjct: 145 PAAAATTTALDGP-GAGGGAERGGSG-----RSSAGGGGGGGGGGGGRGSRRGRGG 194
Score = 32.0 bits (71), Expect = 0.19
Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Query: 68 LAASTAAARGSAGSGSICRTSAA---GGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVG 124
L + A ARG+A + T+ A GAGGGA G GR GG G G G G
Sbjct: 131 LLCAAAEARGAATLPAAAATTTALDGPGAGGGAERGGSGRSSAGGGGG-------GGGGG 183
Query: 125 GSQEQLAG 132
G + G
Sbjct: 184 GGRGSRRG 191
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 35.0 bits (79), Expect = 0.023
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 65 SAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVG 124
S +A + AG+G+ A GAG GA AGAE GPG + G GV
Sbjct: 1889 SEEVAYMGSCVGAEAGAGAEAGAGAEAGAGAGAEAGAEAGAGAGAGPG----TESGAGVW 1944
Query: 125 GSQEQLAGLQLRLKAGHK 142
++ RL AG +
Sbjct: 1945 SWDGDATTVESRLGAGEE 1962
Score = 27.7 bits (60), Expect = 3.6
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 79 AGSGSICRTSAAGGAGGGAA----AGAEGRWVGHGGPGILGSL 117
AG GS TS G G A EG W G GG GS+
Sbjct: 1391 AGGGSWAGTSDQSGGGSKPRFEDQASGEGSWAGAGGQASGGSM 1433
>gi|239749560 PREDICTED: hypothetical protein XP_002347086 [Homo
sapiens]
Length = 443
Score = 35.0 bits (79), Expect = 0.023
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 6/93 (6%)
Query: 54 RPSGALFTRVCSAPLAASTA------AARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVG 107
R GA F S AS AA S+G ++ R +A GG GGG AG GR
Sbjct: 47 RLHGAAFAPPASQAALASAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAW 106
Query: 108 HGGPGILGSLKEGLGVGGSQEQLAGLQLRLKAG 140
P +L G E++ G + + G
Sbjct: 107 GEAPVGSAALSSPTASPGCSEEVHGQRSSFRPG 139
>gi|239743710 PREDICTED: hypothetical protein XP_002342931 [Homo
sapiens]
Length = 522
Score = 35.0 bits (79), Expect = 0.023
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 6/93 (6%)
Query: 54 RPSGALFTRVCSAPLAASTA------AARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVG 107
R GA F S AS AA S+G ++ R +A GG GGG AG GR
Sbjct: 47 RLHGAAFAPPASQAALASAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAW 106
Query: 108 HGGPGILGSLKEGLGVGGSQEQLAGLQLRLKAG 140
P +L G E++ G + + G
Sbjct: 107 GEAPVGSAALSSPTASPGCSEEVHGQRSSFRPG 139
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 35.0 bits (79), Expect = 0.023
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 77 GSAGSGSICRTS-----AAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVGGS 126
G SGS C S + GG GGG++ G G +G G G GS+K G G S
Sbjct: 43 GGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSS 97
Score = 33.1 bits (74), Expect = 0.086
Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 28 TGSGYTILSKTPSSSIVISSSALRGLRPSGALFTRVC--SAPLAASTAAARGSAGSGSIC 85
+GSGY + +S S G G C S S+ GS+G GS C
Sbjct: 204 SGSGYVSSQQVTQTSCAPQPSYGGGSSGGGGSGGSGCFSSGGGGGSSGCGGGSSGIGSGC 263
Query: 86 RTSAAGGAGGGAAAGAEGRWVGHGGPG 112
S G GG ++G G GG G
Sbjct: 264 IISGGGSVCGGGSSGGGGGGSSVGGSG 290
Score = 32.3 bits (72), Expect = 0.15
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 79 AGSGSICRTSAAGGAGGGAAAGAEGRWVG 107
+G GS+C ++GG GGG++ G G G
Sbjct: 266 SGGGSVCGGGSSGGGGGGSSVGGSGSGKG 294
Score = 32.0 bits (71), Expect = 0.19
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 77 GSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVGGS 126
GS+G GS C +S GG+ GG + G G + G+ GGS
Sbjct: 120 GSSGGGSGCFSSGGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGS 169
Score = 31.2 bits (69), Expect = 0.33
Identities = 28/92 (30%), Positives = 34/92 (36%), Gaps = 13/92 (14%)
Query: 46 SSSALRGLRPSGALFTRVCSAPLAASTAAARGSAGSGS-------ICRTSAA------GG 92
SS G SG VC S S GSGS + +TS A GG
Sbjct: 169 SSGGGSGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGG 228
Query: 93 AGGGAAAGAEGRWVGHGGPGILGSLKEGLGVG 124
+ GG +G G + GG G G G+G
Sbjct: 229 SSGGGGSGGSGCFSSGGGGGSSGCGGGSSGIG 260
Score = 31.2 bits (69), Expect = 0.33
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 61 TRVCSAPLAASTAAARGSAGSG-SICRTSAAGGA----GGGAAAGAEGRWVGHGGPGILG 115
T+ AP + + G GSG S C +S GG GGG++ G + GG + G
Sbjct: 215 TQTSCAPQPSYGGGSSGGGGSGGSGCFSSGGGGGSSGCGGGSSGIGSGCIIS-GGGSVCG 273
Query: 116 SLKEGLGVGGS 126
G G GGS
Sbjct: 274 GGSSGGGGGGS 284
Score = 30.8 bits (68), Expect = 0.42
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 86 RTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVGG 125
+TS GG GGG+ G G + G G G GS G G G
Sbjct: 18 KTSGGGGGGGGSGGGGCGFFGGGGSGG--GSSGSGCGYSG 55
Score = 30.8 bits (68), Expect = 0.42
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
Query: 77 GSAGSGSICRTSAAGGA------GGGAAAGAEGRWVGHGG 110
GS+G GS C +S GG+ GGG++ G G + GG
Sbjct: 95 GSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGG 134
Score = 30.8 bits (68), Expect = 0.42
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 15/71 (21%)
Query: 77 GSAGSGSICRTSAAGG--------------AGGGAAAGAEGRW-VGHGGPGILGSLKEGL 121
GS+G GS C +S GG + GG++ G G + G GG + G G
Sbjct: 135 GSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGCFSSGGGGGSVCGYSGGGS 194
Query: 122 GVGGSQEQLAG 132
G GG +G
Sbjct: 195 GCGGGSSGGSG 205
Score = 29.6 bits (65), Expect = 0.95
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 77 GSAGSGSICRTSAAGGAGGG--AAAGAEGRWVGHGGPGILGSLKEGLGVGGSQEQLAG 132
G GSG S G +GGG + G G G GG G +G G G GGS + G
Sbjct: 38 GGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGC--GGGSGGSVKYSGG 93
Score = 29.3 bits (64), Expect = 1.2
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 77 GSAGSGSICRTSAAGGAGGGAAAGAEG------RWVGHGGPGILGSLKEGLGVGGS 126
G SG C ++GG GGG G G ++ G GG GS G GGS
Sbjct: 56 GGGYSGGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGS 111
Score = 28.5 bits (62), Expect = 2.1
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 10/58 (17%)
Query: 78 SAGSGSICRTSAAGG----------AGGGAAAGAEGRWVGHGGPGILGSLKEGLGVGG 125
S G GS C +S GG +GGG ++G GG G G + GG
Sbjct: 106 SGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGG 163
Score = 27.7 bits (60), Expect = 3.6
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 77 GSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHG--GPGILGSLKEGLGVGG 125
GS G G C GG+GGG++ G G G G G G G G GG
Sbjct: 28 GSGGGG--CGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGG 76
>gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo
sapiens]
Length = 1314
Score = 35.0 bits (79), Expect = 0.023
Identities = 28/63 (44%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 65 SAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVG 124
SAP A + +R S GS +AG GGGA AGA VG GG G G+ G G G
Sbjct: 26 SAPSGARLSPSRTSEGSAG-----SAGLGGGGAGAGA---GVGAGGGGGSGA-SSGGGAG 76
Query: 125 GSQ 127
G Q
Sbjct: 77 GLQ 79
Score = 30.4 bits (67), Expect = 0.55
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Query: 46 SSSALRGLRPSGALFTRVCSAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRW 105
S + G PSGA R+ + + +A + G G G+ G GGG+ A +
Sbjct: 19 SGKEVLGSAPSGA---RLSPSRTSEGSAGSAGLGGGGAGAGAGVGAGGGGGSGASS---- 71
Query: 106 VGHGGPGILGSLKEGLG 122
G G G+ S + G G
Sbjct: 72 -GGGAGGLQPSSRAGGG 87
>gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo
sapiens]
Length = 1353
Score = 35.0 bits (79), Expect = 0.023
Identities = 28/63 (44%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 65 SAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVG 124
SAP A + +R S GS +AG GGGA AGA VG GG G G+ G G G
Sbjct: 26 SAPSGARLSPSRTSEGSAG-----SAGLGGGGAGAGA---GVGAGGGGGSGA-SSGGGAG 76
Query: 125 GSQ 127
G Q
Sbjct: 77 GLQ 79
Score = 30.4 bits (67), Expect = 0.55
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Query: 46 SSSALRGLRPSGALFTRVCSAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRW 105
S + G PSGA R+ + + +A + G G G+ G GGG+ A +
Sbjct: 19 SGKEVLGSAPSGA---RLSPSRTSEGSAGSAGLGGGGAGAGAGVGAGGGGGSGASS---- 71
Query: 106 VGHGGPGILGSLKEGLG 122
G G G+ S + G G
Sbjct: 72 -GGGAGGLQPSSRAGGG 87
>gi|34452711 Ca2+-dependent secretion activator isoform 3 [Homo
sapiens]
Length = 1274
Score = 35.0 bits (79), Expect = 0.023
Identities = 28/63 (44%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 65 SAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVG 124
SAP A + +R S GS +AG GGGA AGA VG GG G G+ G G G
Sbjct: 26 SAPSGARLSPSRTSEGSAG-----SAGLGGGGAGAGA---GVGAGGGGGSGA-SSGGGAG 76
Query: 125 GSQ 127
G Q
Sbjct: 77 GLQ 79
Score = 30.4 bits (67), Expect = 0.55
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Query: 46 SSSALRGLRPSGALFTRVCSAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRW 105
S + G PSGA R+ + + +A + G G G+ G GGG+ A +
Sbjct: 19 SGKEVLGSAPSGA---RLSPSRTSEGSAGSAGLGGGGAGAGAGVGAGGGGGSGASS---- 71
Query: 106 VGHGGPGILGSLKEGLG 122
G G G+ S + G G
Sbjct: 72 -GGGAGGLQPSSRAGGG 87
>gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]
Length = 739
Score = 35.0 bits (79), Expect = 0.023
Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 17/80 (21%)
Query: 68 LAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEG-----LG 122
L + AA G A + AAG G AAAGAE G G PG+ GS E G
Sbjct: 35 LLQTLQAAEGEAAA-------AAGAGAGAAAAGAE----GPGSPGVPGSPPEAASEPPTG 83
Query: 123 VGGSQEQLAGL-QLRLKAGH 141
+ S EQ+A + + L+AGH
Sbjct: 84 LRFSPEQVACVCEALLQAGH 103
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 35.0 bits (79), Expect = 0.023
Identities = 24/59 (40%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 77 GSAGSGSICRTSAAGGAGGGA---AAGAEGRWVGHGGPGILGSLKEGLGVGGSQEQLAG 132
G +G G + AGGAG GA AA A G GG G G G GV S Q G
Sbjct: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGG 318
Score = 30.4 bits (67), Expect = 0.55
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 66 APLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLG-VG 124
A AA+ AAA G G G +SA G G +G GG G K G
Sbjct: 282 AAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAA 341
Query: 125 GSQEQLAG 132
G ++ AG
Sbjct: 342 GGFQRFAG 349
Score = 27.3 bits (59), Expect = 4.7
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 15/70 (21%)
Query: 70 ASTAAARGSAGSGSICRTSAAG---------------GAGGGAAAGAEGRWVGHGGPGIL 114
+++AAA G+ GS + S G GAGGG G G GG G
Sbjct: 210 SASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGG 269
Query: 115 GSLKEGLGVG 124
G+ G G G
Sbjct: 270 GAGAGGAGAG 279
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 35.0 bits (79), Expect = 0.023
Identities = 24/59 (40%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 77 GSAGSGSICRTSAAGGAGGGA---AAGAEGRWVGHGGPGILGSLKEGLGVGGSQEQLAG 132
G +G G + AGGAG GA AA A G GG G G G GV S Q G
Sbjct: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGG 318
Score = 30.4 bits (67), Expect = 0.55
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 66 APLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLG-VG 124
A AA+ AAA G G G +SA G G +G GG G K G
Sbjct: 282 AAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAA 341
Query: 125 GSQEQLAG 132
G ++ AG
Sbjct: 342 GGFQRFAG 349
Score = 27.3 bits (59), Expect = 4.7
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 15/70 (21%)
Query: 70 ASTAAARGSAGSGSICRTSAAG---------------GAGGGAAAGAEGRWVGHGGPGIL 114
+++AAA G+ GS + S G GAGGG G G GG G
Sbjct: 210 SASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGG 269
Query: 115 GSLKEGLGVG 124
G+ G G G
Sbjct: 270 GAGAGGAGAG 279
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 35.0 bits (79), Expect = 0.023
Identities = 24/59 (40%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 77 GSAGSGSICRTSAAGGAGGGA---AAGAEGRWVGHGGPGILGSLKEGLGVGGSQEQLAG 132
G +G G + AGGAG GA AA A G GG G G G GV S Q G
Sbjct: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGG 318
Score = 30.4 bits (67), Expect = 0.55
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 66 APLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLG-VG 124
A AA+ AAA G G G +SA G G +G GG G K G
Sbjct: 282 AAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAA 341
Query: 125 GSQEQLAG 132
G ++ AG
Sbjct: 342 GGFQRFAG 349
Score = 27.3 bits (59), Expect = 4.7
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 15/70 (21%)
Query: 70 ASTAAARGSAGSGSICRTSAAG---------------GAGGGAAAGAEGRWVGHGGPGIL 114
+++AAA G+ GS + S G GAGGG G G GG G
Sbjct: 210 SASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGG 269
Query: 115 GSLKEGLGVG 124
G+ G G G
Sbjct: 270 GAGAGGAGAG 279
>gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo
sapiens]
Length = 286
Score = 34.7 bits (78), Expect = 0.029
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 55 PSGALFTRVCSAPLAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGG 110
P+ A T P A A A+ G R+SA GG GGG G G G GG
Sbjct: 145 PAAAATTTALDGPGAGGGAEAQFLGGG----RSSAGGGGGGGGGGGGRGSRRGRGG 196
Score = 28.9 bits (63), Expect = 1.6
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 68 LAASTAAARGSAGSGSICRTSAAGGAGGGAAAGAEGRWVGHGGPGILGSLKEGLGVGGSQ 127
L + A ARG+A + T+ A G GA GAE +++G GG G G G GG +
Sbjct: 131 LLCAAAEARGAATLPAAAATTTALD-GPGAGGGAEAQFLG-GGRSSAGGGGGGGGGGGGR 188
Query: 128 EQLAG 132
G
Sbjct: 189 GSRRG 193
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.129 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,425,292
Number of Sequences: 37866
Number of extensions: 333941
Number of successful extensions: 5022
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 278
Number of HSP's that attempted gapping in prelim test: 2678
Number of HSP's gapped (non-prelim): 1679
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.