RFX1 16206

Name: RFX1	Sequence: fasta or formatted (979aa)		NCBI GI: 238859557
Description: regulatory factor X1		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 96 3 C cysteine 0.6 6 1 D aspartate 2.6 25 1 E glutamate 5.3 52 8 F phenylalanine 2.0 20 1 G glycine 8.1 79 14 H histidine 1.8 18 1 I isoleucine 2.2 22 1 K lysine 3.0 29 1 L leucine 8.8 86 2 M methionine 1.8 18 1 N asparagine 2.0 20 1 P proline 9.1 89 7 Q glutamine 10.7 105 3 R arginine 3.7 36 2 S serine 9.3 91 4 T threonine 6.5 64 2 V valine 8.3 81 2 W tryptophan 0.9 9 1 Y tyrosine 3.4 33 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 regulatory factor X1 RFX3 0.396 regulatory factor X3 isoform b RFX3 0.386 regulatory factor X3 isoform a RFX2 0.376 regulatory factor X2 isoform b RFX2 0.369 regulatory factor X2 isoform a RFX4 0.137 regulatory factor X4 isoform b RFX4 0.137 regulatory factor X4 isoform c RFX6 0.113 regulatory factor X, 6 RFX4 0.090 regulatory factor X4 isoform a YEATS2 0.032 YEATS domain containing 2 LOC731220 0.031 hypothetical protein LOC731220 BRD4 0.027 bromodomain-containing protein 4 isoform long EP400 0.026 E1A binding protein p400 FLJ22184 0.026 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.026 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.026 PREDICTED: hypothetical protein LOC80164 BPTF 0.024 bromodomain PHD finger transcription factor isoform ... POU6F2 0.024 POU domain, class 6, transcription factor 2 ZIC2 0.023 zinc finger protein of the cerebellum 2 RFX7 0.023 regulatory factor X domain containing 2 WBP11 0.023 WW domain binding protein 11 EVX2 0.022 even-skipped homeobox 2 DACH1 0.022 dachshund homolog 1 isoform b DACH1 0.022 dachshund homolog 1 isoform a DACH1 0.022 dachshund homolog 1 isoform c TCERG1 0.022 transcription elongation regulator 1 isoform 2 [Homo... TCERG1 0.022 transcription elongation regulator 1 isoform 1 [Homo... MUC2 0.021 mucin 2 precursor PCLO 0.021 piccolo isoform 2 PCLO 0.021 piccolo isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.