Guide to the Human Genome
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Name: CADPS Sequence: fasta or formatted (1353aa) NCBI GI: 34452715
Description:

Ca2+-dependent secretion activator isoform 1

Referenced in:

Neurons

Other entries for this name:
alt prot [1274aa] Ca2+-dependent secretion activator isoform 3
alt prot [1314aa] Ca2+-dependent secretion activator isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         92           2
 C cysteine            1.4         19           1
 D aspartate           5.7         77           2
 E glutamate           8.9        120           4
 F phenylalanine       4.2         57           2
 G glycine             6.1         83           5
 H histidine           2.2         30           2
 I isoleucine          3.9         53           2
 K lysine              6.6         89           2
 L leucine             9.5        129           2
 M methionine          3.3         44           1
 N asparagine          3.5         48           1
 P proline             4.3         58           2
 Q glutamine           5.2         71           2
 R arginine            5.4         73           2
 S serine              7.8        106           3
 T threonine           4.4         59           2
 V valine              6.9         93           2
 W tryptophan          1.3         17           2
 Y tyrosine            2.6         35           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ca2+-dependent secretion activator isoform 1 
CADPS                 0.936   Ca2+-dependent secretion activator isoform 2 
CADPS                 0.921   Ca2+-dependent secretion activator isoform 3 
CADPS2                0.749   Ca2+-dependent activator protein for secretion 2 is...
CADPS2                0.724   Ca2+-dependent activator protein for secretion 2 is...
YEATS2                0.014   YEATS domain containing 2 
RFX1                  0.012   regulatory factor X1 
SHOX2                 0.012   short stature homeobox 2 isoform a 
MAF                   0.011   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAF                   0.011   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
KRT10                 0.011   keratin 10 
FOXD1                 0.011   forkhead box D1 
SIX3                  0.010   sine oculis homeobox homolog 3 
ZIC2                  0.010   zinc finger protein of the cerebellum 2 
LRCH2                 0.010   leucine-rich repeats and calponin homology (CH) dom...
FAM98B                0.010   family with sequence similarity 98, member B isofor...
WIPF1                 0.010   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.010   WAS/WASL interacting protein family, member 1 
POU4F1                0.010   POU domain, class 4, transcription factor 1 
PURA                  0.009   purine-rich element binding protein A 
KRT2                  0.009   keratin 2 
TWIST1                0.009   twist 
GSK3A                 0.009   glycogen synthase kinase 3 alpha 
DACH1                 0.009   dachshund homolog 1 isoform b 
DACH1                 0.009   dachshund homolog 1 isoform a 
DACH1                 0.009   dachshund homolog 1 isoform c 
ARID1B                0.009   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.009   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.009   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
KRT9                  0.009   keratin 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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