Guide to the Human Genome
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Name: YEATS2 Sequence: fasta or formatted (1422aa) NCBI GI: 33620755
Description:

YEATS domain containing 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2        103           2
 C cysteine            1.1         16           1
 D aspartate           3.1         44           1
 E glutamate           5.1         73           3
 F phenylalanine       2.1         30           2
 G glycine             8.1        115          11
 H histidine           2.5         35           2
 I isoleucine          5.6         80           2
 K lysine              6.8         96           2
 L leucine             6.5         92           3
 M methionine          1.5         22           2
 N asparagine          3.7         52           2
 P proline             8.0        114           2
 Q glutamine           6.4         91           3
 R arginine            3.1         44           2
 S serine             11.1        158           3
 T threonine           8.3        118           2
 V valine              7.9        112           2
 W tryptophan          0.4          6           1
 Y tyrosine            1.5         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   YEATS domain containing 2 
YEATS4                0.022   glioma-amplified sequence-41 
MUC17                 0.022   mucin 17 
RFX1                  0.022   regulatory factor X1 
MUC12                 0.020   PREDICTED: mucin 12 
MUC4                  0.018   mucin 4 isoform a 
MUC5B                 0.018   mucin 5, subtype B, tracheobronchial 
LOC100290496          0.017   PREDICTED: hypothetical protein XP_002348126 
MUC12                 0.017   PREDICTED: mucin 12, cell surface associated 
ZIC2                  0.016   zinc finger protein of the cerebellum 2 
MLLT1                 0.015   myeloid/lymphoid or mixed-lineage leukemia (trithora...
ASXL2                 0.015   additional sex combs like 2 
KRT9                  0.014   keratin 9 
CADPS                 0.013   Ca2+-dependent secretion activator isoform 2 
CADPS                 0.013   Ca2+-dependent secretion activator isoform 1 
CADPS                 0.013   Ca2+-dependent secretion activator isoform 3 
FAM98B                0.013   family with sequence similarity 98, member B isofor...
ARID1B                0.013   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.013   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.013   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
SIX3                  0.012   sine oculis homeobox homolog 3 
DACH1                 0.012   dachshund homolog 1 isoform b 
DACH1                 0.012   dachshund homolog 1 isoform a 
DACH1                 0.012   dachshund homolog 1 isoform c 
MUC21                 0.012   mucin 21 
POU4F1                0.012   POU domain, class 4, transcription factor 1 
SHOX2                 0.012   short stature homeobox 2 isoform a 
LOC100294249          0.012   PREDICTED: hypothetical protein XP_002344067 
LOR                   0.012   loricrin 
LOC729792             0.012   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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