Guide to the Human Genome
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Name: LOC100294462 Sequence: fasta or formatted (147aa) NCBI GI: 239752182
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.9         19           3
 C cysteine            1.4          2           1
 D aspartate           1.4          2           1
 E glutamate           4.8          7           1
 F phenylalanine       0.7          1           1
 G glycine            19.0         28           3
 H histidine           1.4          2           1
 I isoleucine          4.1          6           1
 K lysine              4.1          6           1
 L leucine            10.2         15           1
 M methionine          0.7          1           1
 N asparagine          0.7          1           1
 P proline             4.8          7           1
 Q glutamine           3.4          5           1
 R arginine            6.1          9           1
 S serine             14.3         21           3
 T threonine           4.8          7           1
 V valine              2.7          4           1
 W tryptophan          1.4          2           1
 Y tyrosine            1.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100291691          1.000   PREDICTED: hypothetical protein XP_002345524 
LOC100288476          0.808   PREDICTED: hypothetical protein XP_002343815 
ZIC2                  0.079   zinc finger protein of the cerebellum 2 
NKX2-3                0.060   NK2 transcription factor related, locus 3 
YEATS2                0.053   YEATS domain containing 2 
EVX2                  0.053   even-skipped homeobox 2 
PRDM8                 0.049   PR domain containing 8 
PRDM8                 0.049   PR domain containing 8 
ONECUT3               0.049   one cut homeobox 3 
EN1                   0.045   engrailed homeobox 1 
MAF                   0.045   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAF                   0.045   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
CDV3                  0.045   carnitine deficiency-associated gene expressed in v...
CDV3                  0.045   carnitine deficiency-associated gene expressed in ven...
KRT3                  0.045   keratin 3 
RFX1                  0.045   regulatory factor X1 
LOC100292082          0.041   PREDICTED: hypothetical protein XP_002345881 
LOC100292655          0.038   PREDICTED: similar to armadillo repeat containing, ...
LOC100289745          0.038   PREDICTED: hypothetical protein XP_002347086 
LOC100288749          0.038   PREDICTED: hypothetical protein XP_002342931 
LOR                   0.038   loricrin 
CADPS                 0.038   Ca2+-dependent secretion activator isoform 2 
CADPS                 0.038   Ca2+-dependent secretion activator isoform 1 
CADPS                 0.038   Ca2+-dependent secretion activator isoform 3 
SIX5                  0.038   sine oculis homeobox homolog 5 
ARID1B                0.038   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.038   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.038   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
LOC100290709          0.038   PREDICTED: hypothetical protein XP_002346752 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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