LOC100288007 19233

Name: LOC100288007	Sequence: fasta or formatted (209aa)		NCBI GI: 239747516
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt mRNA {209aa} PREDICTED: hypothetical protein XP_002342192
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 13 3 C cysteine 2.9 6 2 D aspartate 5.3 11 1 E glutamate 8.1 17 6 F phenylalanine 3.8 8 1 G glycine 15.8 33 5 H histidine 1.4 3 1 I isoleucine 1.9 4 1 K lysine 4.3 9 2 L leucine 6.2 13 2 M methionine 1.4 3 1 N asparagine 3.8 8 1 P proline 4.8 10 2 Q glutamine 3.3 7 2 R arginine 9.1 19 2 S serine 11.5 24 3 T threonine 3.8 8 2 V valine 2.4 5 1 W tryptophan 2.4 5 1 Y tyrosine 1.4 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100288007 1.000 PREDICTED: hypothetical protein XP_002342192 TWIST1 0.050 twist ARID1B 0.048 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1B 0.048 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID1B 0.048 AT rich interactive domain 1B (SWI1-like) isoform 3 ... SUZ12 0.048 joined to JAZF1 MPND 0.043 MPN domain containing isoform 2 MPND 0.043 MPN domain containing isoform 1 FAM98B 0.043 family with sequence similarity 98, member B isofor... FBL 0.043 fibrillarin SHOX2 0.041 short stature homeobox 2 isoform a HNRNPL 0.041 heterogeneous nuclear ribonucleoprotein L isoform a ... NCL 0.041 nucleolin CAPNS1 0.041 calpain, small subunit 1 CAPNS1 0.041 calpain, small subunit 1 KRT9 0.038 keratin 9 ADRA1D 0.038 alpha-1D-adrenergic receptor ANKS1A 0.038 ankyrin repeat and sterile alpha motif domain conta... RFX1 0.036 regulatory factor X1 RPS2 0.036 ribosomal protein S2 LOC100292082 0.036 PREDICTED: hypothetical protein XP_002345881 FUS 0.036 fusion (involved in t(12;16) in malignant liposarcoma... DHX36 0.036 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2... DHX36 0.036 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1... RPGR 0.036 retinitis pigmentosa GTPase regulator isoform C [Hom... LOR 0.036 loricrin POU4F1 0.036 POU domain, class 4, transcription factor 1 SIX3 0.034 sine oculis homeobox homolog 3 YEATS2 0.034 YEATS domain containing 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.