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Search of human proteins with 116805334
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116805334 Ras-induced senescence 1 [Homo sapiens]
(300 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116805334 Ras-induced senescence 1 [Homo sapiens] 602 e-172
gi|110832843 TBP-associated factor 4 [Homo sapiens] 42 7e-04
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 39 0.006
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 39 0.006
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 39 0.007
gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens] 38 0.010
gi|239757559 PREDICTED: hypothetical protein [Homo sapiens] 38 0.012
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 38 0.012
gi|19111150 angiomotin isoform 2 [Homo sapiens] 37 0.021
gi|166064029 angiomotin isoform 1 [Homo sapiens] 37 0.021
gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens] 37 0.028
gi|24497554 homeobox A13 [Homo sapiens] 36 0.047
gi|134142824 forkhead box D2 [Homo sapiens] 36 0.047
gi|151301228 formin binding protein 3 [Homo sapiens] 36 0.047
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 36 0.047
gi|157151759 hypothetical protein LOC642587 [Homo sapiens] 36 0.047
gi|17402888 neuronal pentraxin receptor [Homo sapiens] 35 0.081
gi|187960059 syndecan 3 [Homo sapiens] 35 0.081
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 35 0.081
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 35 0.081
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 35 0.081
gi|210031233 PR domain containing 6 [Homo sapiens] 35 0.081
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 35 0.081
gi|9966803 poly(rC) binding protein 4 isoform a [Homo sapiens] 35 0.11
gi|14670373 poly(rC) binding protein 4 isoform c [Homo sapiens] 35 0.11
gi|14670369 poly(rC) binding protein 4 isoform c [Homo sapiens] 35 0.11
gi|38016945 deformed epidermal autoregulatory factor 1 [Homo sap... 35 0.11
gi|239749940 PREDICTED: similar to deformed epidermal autoregula... 35 0.11
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 35 0.11
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 35 0.11
>gi|116805334 Ras-induced senescence 1 [Homo sapiens]
Length = 300
Score = 602 bits (1552), Expect = e-172
Identities = 300/300 (100%), Positives = 300/300 (100%)
Query: 1 MLPLLAALLAAACPLPPVRGGAADAPGLLGVPSNASVNASSADEPIAPRLLASAAPGPPE 60
MLPLLAALLAAACPLPPVRGGAADAPGLLGVPSNASVNASSADEPIAPRLLASAAPGPPE
Sbjct: 1 MLPLLAALLAAACPLPPVRGGAADAPGLLGVPSNASVNASSADEPIAPRLLASAAPGPPE 60
Query: 61 RPGPEEAAAAAAPCNISVQRQMLSSLLVRWGRPRGFQCDLLLFSTNAHGRAFFAAAFHRV 120
RPGPEEAAAAAAPCNISVQRQMLSSLLVRWGRPRGFQCDLLLFSTNAHGRAFFAAAFHRV
Sbjct: 61 RPGPEEAAAAAAPCNISVQRQMLSSLLVRWGRPRGFQCDLLLFSTNAHGRAFFAAAFHRV 120
Query: 121 GPPLLIEHLGLAAGGAQQDLRLCVGCGWVRGRRTGRLRPAAAPSAAAATAGAPTALPAYP 180
GPPLLIEHLGLAAGGAQQDLRLCVGCGWVRGRRTGRLRPAAAPSAAAATAGAPTALPAYP
Sbjct: 121 GPPLLIEHLGLAAGGAQQDLRLCVGCGWVRGRRTGRLRPAAAPSAAAATAGAPTALPAYP 180
Query: 181 AAEPPGPLWLQGEPLHFCCLDFSLEELQGEPGWRLNRKPIESTLVACFMTLVIVVWSVAA 240
AAEPPGPLWLQGEPLHFCCLDFSLEELQGEPGWRLNRKPIESTLVACFMTLVIVVWSVAA
Sbjct: 181 AAEPPGPLWLQGEPLHFCCLDFSLEELQGEPGWRLNRKPIESTLVACFMTLVIVVWSVAA 240
Query: 241 LIWPVPIIAGFLPNGMEQRRTTASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTSGVATK 300
LIWPVPIIAGFLPNGMEQRRTTASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTSGVATK
Sbjct: 241 LIWPVPIIAGFLPNGMEQRRTTASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTSGVATK 300
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 42.0 bits (97), Expect = 7e-04
Identities = 53/194 (27%), Positives = 65/194 (33%), Gaps = 41/194 (21%)
Query: 1 MLPLLAALLAAACPLPPVRGGAADAPGLLGVPSNASVNASSADEPIAPR-------LLAS 53
++P A AA PP + AP VP+ A+V A P P L A
Sbjct: 114 LVPAGPAPPAAKLRPPPEGSAGSCAP----VPAAAAVAAGPEPAPAGPAKPAGPAALAAR 169
Query: 54 AAPGPPERPGPEEAAAAAAPCNISVQRQMLSSLLVRWGRPRGFQCDLLLFSTNAHGRAFF 113
A PGP PGP P + + S + N+H A
Sbjct: 170 AGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAAL----------------LNSHHAAAP 213
Query: 114 AAAFHRVGPPLLIEHLGLAAGGAQQDLRLCVGCGWVRGRRTGRLRPAAAPSAAAATAGAP 173
A + GP L+ AA G VG AAAP A AA +
Sbjct: 214 AVSLVNNGPAALLPLPKPAAPGTVIQTPPFVG--------------AAAPPAPAAPSPPA 259
Query: 174 TALPAYPAAEPPGP 187
PA PAA PP P
Sbjct: 260 APAPAAPAAAPPPP 273
Score = 35.0 bits (79), Expect = 0.081
Identities = 29/80 (36%), Positives = 31/80 (38%), Gaps = 9/80 (11%)
Query: 3 PLLAALLAAACPLPPVRGGAADAPGLLGVPSNASV---------NASSADEPIAPRLLAS 53
P AA AA P PP A PG P A+ N SA AP A
Sbjct: 261 PAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAG 320
Query: 54 AAPGPPERPGPEEAAAAAAP 73
G +PGP AAAA AP
Sbjct: 321 GPAGVSGQPGPGAAAAAPAP 340
Score = 28.9 bits (63), Expect = 5.8
Identities = 25/79 (31%), Positives = 29/79 (36%), Gaps = 13/79 (16%)
Query: 6 AALLAAACPLPPVRGGAADAPGLLGVPSNASVNASSADEPIAPRLLASAAPGPPERP--- 62
AALL P P G P +G + + A S AP A+A P PP P
Sbjct: 223 AALLPL--PKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATL 280
Query: 63 --------GPEEAAAAAAP 73
GP AA A P
Sbjct: 281 ARPPGHPAGPPTAAPAVPP 299
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 38.9 bits (89), Expect = 0.006
Identities = 57/232 (24%), Positives = 77/232 (33%), Gaps = 62/232 (26%)
Query: 15 LPPVRGGAADAPGLLGVPSNASVNASSADEPIAPRLLASAAPGPPERPGPEEAAAAAAPC 74
+PP GG PG P A+SA AP ++S P P P P A +AAP
Sbjct: 277 VPPAAGGPPQ-PGPHLPPLGLPAPAASAATAAAPSTVSSGPPATPVAPAPS-ADGSAAPA 334
Query: 75 NISVQ-----------------------RQMLSSLLVRWGRPRGFQC------------- 98
+ V + ++ G + F C
Sbjct: 335 GVGVPPPATGGGDGPFACPLCWKVFKKPSHLHQHQIIHTGE-KPFSCSVCSKSFNRRESL 393
Query: 99 ---------DLLLFSTNAHGRAFFAAAFHRVGPPLLIEHLGLAAG---GAQQDLRLCVGC 146
DLL G+AF A++ L++H AG G + + C C
Sbjct: 394 KRHVKTHSADLLRLPCGICGKAFRDASY-------LLKHQAAHAGAGAGGPRPVYPCDLC 446
Query: 147 GWVRGRRTGRLRPAAAPSAAAATAGAP----TALPAYPAAEPPGPLWLQGEP 194
G LR AA + AA A AP + P P PPGP L +P
Sbjct: 447 GKSYSAPQSLLRHKAAHAPPAAAAEAPKDGAASAPQPPPTFPPGPYLLPPDP 498
Score = 28.5 bits (62), Expect = 7.6
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Query: 159 PAAAPSAA---AATAGAPTALPAYPAAEPPGP 187
PA+ P A AGAP LPA P+ PPGP
Sbjct: 167 PASGPGVTPGLGAPAGAPGPLPA-PSQTPPGP 197
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 38.9 bits (89), Expect = 0.006
Identities = 57/232 (24%), Positives = 77/232 (33%), Gaps = 62/232 (26%)
Query: 15 LPPVRGGAADAPGLLGVPSNASVNASSADEPIAPRLLASAAPGPPERPGPEEAAAAAAPC 74
+PP GG PG P A+SA AP ++S P P P P A +AAP
Sbjct: 277 VPPAAGGPPQ-PGPHLPPLGLPAPAASAATAAAPSTVSSGPPATPVAPAPS-ADGSAAPA 334
Query: 75 NISVQ-----------------------RQMLSSLLVRWGRPRGFQC------------- 98
+ V + ++ G + F C
Sbjct: 335 GVGVPPPATGGGDGPFACPLCWKVFKKPSHLHQHQIIHTGE-KPFSCSVCSKSFNRRESL 393
Query: 99 ---------DLLLFSTNAHGRAFFAAAFHRVGPPLLIEHLGLAAG---GAQQDLRLCVGC 146
DLL G+AF A++ L++H AG G + + C C
Sbjct: 394 KRHVKTHSADLLRLPCGICGKAFRDASY-------LLKHQAAHAGAGAGGPRPVYPCDLC 446
Query: 147 GWVRGRRTGRLRPAAAPSAAAATAGAP----TALPAYPAAEPPGPLWLQGEP 194
G LR AA + AA A AP + P P PPGP L +P
Sbjct: 447 GKSYSAPQSLLRHKAAHAPPAAAAEAPKDGAASAPQPPPTFPPGPYLLPPDP 498
Score = 28.5 bits (62), Expect = 7.6
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Query: 159 PAAAPSAA---AATAGAPTALPAYPAAEPPGP 187
PA+ P A AGAP LPA P+ PPGP
Sbjct: 167 PASGPGVTPGLGAPAGAPGPLPA-PSQTPPGP 197
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 38.5 bits (88), Expect = 0.007
Identities = 36/143 (25%), Positives = 54/143 (37%), Gaps = 15/143 (10%)
Query: 164 SAAAATAGAPTALPAYPAAEPPGPLWLQGE--------PLHFCCLDFSLEELQG------ 209
S +++ + + L ++ E P P+W+Q P L S ++
Sbjct: 423 SHSSSGPASVSQLSSWKTPEQPDPVWVQSSVSGKGEKHPPPRTQLPSSSGKISSGNSFPP 482
Query: 210 -EPGWRLNRKPIESTLVACFMTLVIVVWSVAALIWPVPIIAGFLPNGMEQRRTTASTTAA 268
+ G L R + +A + AA P P +A + A AA
Sbjct: 483 QQAGSPLKRPFSAAAAIAAAAAAAAAAAAAAAAAAPAPALAAAAAPALAAAAAPALAAAA 542
Query: 269 TPAAVPAGTTAAAAAAAAAAAAA 291
PA PA A AAA AAAA+AA
Sbjct: 543 APAPAPAAAPAVAAAPAAAASAA 565
Score = 37.7 bits (86), Expect = 0.012
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 5 LAALLAAACPLPPVRGGAADAPGLLGVPSNASVNASSADEPIAPRLLASAAPGPPERPGP 64
+AA AAA AA AP L + A A+ AP L A+AAP P P
Sbjct: 499 IAAAAAAAAAAAAAAAAAAPAPALAAAAAPALAAAA------APALAAAAAPAPAPAAAP 552
Query: 65 EEAAAAAAPCNISVQRQMLSSL-LVRWGRP 93
AAA AA + + S+ L++ RP
Sbjct: 553 AVAAAPAAAASAAPSHSQKPSVPLIQASRP 582
Score = 32.7 bits (73), Expect = 0.40
Identities = 19/36 (52%), Positives = 21/36 (58%)
Query: 263 ASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTSGVA 298
A+ AA AA PA AAAAA A AAAAA + A
Sbjct: 507 AAAAAAAAAAAPAPALAAAAAPALAAAAAPALAAAA 542
Score = 32.0 bits (71), Expect = 0.68
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 245 VPIIAGFLPNGMEQRRTTASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTS 295
+P +G + +G A + P + A AAAAAAAAAAAAAA +
Sbjct: 467 LPSSSGKISSGNSFPPQQAGSPLKRPFSAAAAIAAAAAAAAAAAAAAAAAA 517
Score = 31.2 bits (69), Expect = 1.2
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 265 TTAATPAAVPAGTTAAAAAAAAAAAAAAVTSGVA 298
+ AA AA A AAAAAAAAAA A A+ + A
Sbjct: 494 SAAAAIAAAAAAAAAAAAAAAAAAPAPALAAAAA 527
Score = 30.8 bits (68), Expect = 1.5
Identities = 17/32 (53%), Positives = 19/32 (59%)
Query: 267 AATPAAVPAGTTAAAAAAAAAAAAAAVTSGVA 298
A +P P AA AAAAAAAAAAA + A
Sbjct: 485 AGSPLKRPFSAAAAIAAAAAAAAAAAAAAAAA 516
Score = 30.8 bits (68), Expect = 1.5
Identities = 18/38 (47%), Positives = 21/38 (55%)
Query: 261 TTASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTSGVA 298
+ A+ AA AA A AAAAAA A A AAA +A
Sbjct: 494 SAAAAIAAAAAAAAAAAAAAAAAAPAPALAAAAAPALA 531
Score = 29.6 bits (65), Expect = 3.4
Identities = 18/44 (40%), Positives = 22/44 (50%)
Query: 255 GMEQRRTTASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTSGVA 298
G +R ++ A AA A AAAAAAAA A A A + A
Sbjct: 486 GSPLKRPFSAAAAIAAAAAAAAAAAAAAAAAAPAPALAAAAAPA 529
Score = 29.3 bits (64), Expect = 4.4
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 15/42 (35%)
Query: 159 PAAAPSAAAATAGAPTALPAY---------------PAAEPP 185
PAAAP+ AAA A A +A P++ PAA+PP
Sbjct: 548 PAAAPAVAAAPAAAASAAPSHSQKPSVPLIQASRPCPAAQPP 589
Score = 28.5 bits (62), Expect = 7.6
Identities = 17/36 (47%), Positives = 19/36 (52%)
Query: 263 ASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTSGVA 298
A+ AA AA A A AAAAA A AAA +A
Sbjct: 504 AAAAAAAAAAAAAAPAPALAAAAAPALAAAAAPALA 539
Score = 28.5 bits (62), Expect = 7.6
Identities = 16/29 (55%), Positives = 17/29 (58%)
Query: 159 PAAAPSAAAATAGAPTALPAYPAAEPPGP 187
PA A +AAAA A A A PA AA P P
Sbjct: 518 PAPALAAAAAPALAAAAAPALAAAAAPAP 546
>gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
Length = 1215
Score = 38.1 bits (87), Expect = 0.010
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 266 TAATPAAVPAGTTAAAAAAAAAAAAAAVTSG 296
++++PAA A T+AAAAAAAAAAAAA +G
Sbjct: 155 SSSSPAATSAAATSAAAAAAAAAAAAAAAAG 185
Score = 34.7 bits (78), Expect = 0.11
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 262 TASTTAATPAAVPAGTTAAAAAAAAAAAAA 291
++S+ AAT AA + AAAAAAAAAAAAA
Sbjct: 155 SSSSPAATSAAATSAAAAAAAAAAAAAAAA 184
Score = 33.1 bits (74), Expect = 0.31
Identities = 21/45 (46%), Positives = 24/45 (53%)
Query: 249 AGFLPNGMEQRRTTASTTAATPAAVPAGTTAAAAAAAAAAAAAAV 293
AG G A++ AAT AA A AAAAAAAA A A +V
Sbjct: 147 AGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSV 191
Score = 32.0 bits (71), Expect = 0.68
Identities = 16/25 (64%), Positives = 19/25 (76%)
Query: 274 PAGTTAAAAAAAAAAAAAAVTSGVA 298
PA T+AAA +AAAAAAAAA + A
Sbjct: 159 PAATSAAATSAAAAAAAAAAAAAAA 183
Score = 29.6 bits (65), Expect = 3.4
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 255 GMEQRRTTASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTSGVA 298
G S A + AA A AAAAAAA A A + +G A
Sbjct: 154 GSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSVGAAGAA 197
>gi|239757559 PREDICTED: hypothetical protein [Homo sapiens]
Length = 196
Score = 37.7 bits (86), Expect = 0.012
Identities = 51/173 (29%), Positives = 66/173 (38%), Gaps = 24/173 (13%)
Query: 28 LLGVPSNASVNASSADEPIAPRLLASAAPGPPERPGPEEAAAAAAPCNISVQRQMLSSLL 87
+ +P N ++ SA P P + AAP R + ++A P +I+ R S+LL
Sbjct: 27 MFSLPQNMAI-WGSASRPALPSV--GAAPTSSARAVQAASRSSAKPGSIATLRGAPSALL 83
Query: 88 VRWGRPRGFQCDLLLFSTNAHGRAFFAAAFHRVGPPLLIEHLGLAAGGAQQDLRLCVGCG 147
W PR + + RA +A P L E GGAQ +
Sbjct: 84 CEWDPPRPCSARAATAAVSRGPRARSSACSRLPLPRKLTEPE--RGGGAQSQASQLI--- 138
Query: 148 WVRGRRTG-RLRPAAAP------------SAAAATAGAPTALPAYPAAEPPGP 187
R G R RP AAP S A T AP A PA P A PP P
Sbjct: 139 --RPTPLGTRERPLAAPPGNCARSRREGPSRPAPTGAAPLAPPA-PHAPPPLP 188
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 37.7 bits (86), Expect = 0.012
Identities = 27/66 (40%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 240 ALIWPVPIIAGFLPNGMEQRRTTASTTAATPAAVP------AGTTAAAAAAAAAAAAAAV 293
A+ WP P F M T S + VP G TAAAAAAAA+ AAAA
Sbjct: 249 AMSWPHPADPSFYTYMMTHAAATGSLPYPFHSHVPLHYYPHVGVTAAAAAAAASGAAAAA 308
Query: 294 TSGVAT 299
+S AT
Sbjct: 309 SSPFAT 314
Score = 32.7 bits (73), Expect = 0.40
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 270 PAAVPAGTTAAAAAAAAAAAAAAVTSGVA 298
PAA +AA+AAAAAAAAAAA +S A
Sbjct: 347 PAAAAGLNSAASAAAAAAAAAAAASSAAA 375
Score = 30.8 bits (68), Expect = 1.5
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 247 IIAGFLPNGMEQRRTTASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTSGVA 298
++ F G+ Q A+ + +A A AAAAA++AAAA A + G A
Sbjct: 334 LLCSFRHPGLYQAPAAAAGLNSAASAAAAAAAAAAAASSAAAAGAPPSGGSA 385
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 37.0 bits (84), Expect = 0.021
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 6 AALLAAACPLPPVRGGAADAPGLLGVPSNASVNASSADEPIAPRLLASAAPGPPERPGPE 65
+A AAA + P AP L+ VP+ A+ AS+ + AP + AP P P P
Sbjct: 553 SAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAVAPTPAPTPTPA 612
Query: 66 EAAA 69
A A
Sbjct: 613 VAQA 616
Score = 35.0 bits (79), Expect = 0.081
Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 237 SVAALIWPVPIIAGFLPNGMEQRRTTASTT--AATPAAVPAGTTAAAAAA---AAAAAAA 291
+VA + P P+ A + T +TT AA P AV A AAAAA A AAA A
Sbjct: 468 AVAPISVPAPVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAAATA 527
Query: 292 AVTSGVA 298
A S A
Sbjct: 528 AAVSPAA 534
Score = 34.3 bits (77), Expect = 0.14
Identities = 23/76 (30%), Positives = 34/76 (44%)
Query: 223 TLVACFMTLVIVVWSVAALIWPVPIIAGFLPNGMEQRRTTASTTAATPAAVPAGTTAAAA 282
T A +T +V + A+ A P+ T A+ + A +PA + A+A
Sbjct: 488 TATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASA 547
Query: 283 AAAAAAAAAAVTSGVA 298
AA A +AAAA VA
Sbjct: 548 AAVAPSAAAAAAVQVA 563
Score = 33.5 bits (75), Expect = 0.23
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 258 QRRTTASTTAAT-PAAVPAGTTAAAAAAAAAAAAAAVTS 295
+R T ++ TAA P +VPA AAA AAA A AA +T+
Sbjct: 458 ERGTESNKTAAVAPISVPAPVAAAATAAAITATAATITT 496
Score = 30.0 bits (66), Expect = 2.6
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Query: 6 AALLAAACPLPPVRGGAADA--PGLLG-VPSNASVNASSADEPIAPRL----LASAAPGP 58
AA AAA P P A A P G +P+ ASV +++A P A +A AAP P
Sbjct: 510 AAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAP 569
Query: 59 PERPG----PEEAAAAAA 72
P P AAA A+
Sbjct: 570 VPAPALVPVPAPAAAQAS 587
Score = 29.3 bits (64), Expect = 4.4
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 255 GMEQRRTTASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTS 295
G E +T A + PA V A TAAA A AA + +
Sbjct: 460 GTESNKTAAVAPISVPAPVAAAATAAAITATAATITTTMVA 500
Score = 28.9 bits (63), Expect = 5.8
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 13/81 (16%)
Query: 220 IESTLVACFMTLVIVVWSVAALIWPVPIIAGFLPNGMEQRRTTASTTAATPAAVPAGTTA 279
I +T+VA V + AA P P T A+T AA A A
Sbjct: 494 ITTTMVAAAPVAVAAAAAPAAAAAPSPA-------------TAAATAAAVSPAAAGQIPA 540
Query: 280 AAAAAAAAAAAAAVTSGVATK 300
AA+ A+AAA A + + A +
Sbjct: 541 AASVASAAAVAPSAAAAAAVQ 561
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 37.0 bits (84), Expect = 0.021
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 6 AALLAAACPLPPVRGGAADAPGLLGVPSNASVNASSADEPIAPRLLASAAPGPPERPGPE 65
+A AAA + P AP L+ VP+ A+ AS+ + AP + AP P P P
Sbjct: 962 SAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAVAPTPAPTPTPA 1021
Query: 66 EAAA 69
A A
Sbjct: 1022 VAQA 1025
Score = 35.0 bits (79), Expect = 0.081
Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 237 SVAALIWPVPIIAGFLPNGMEQRRTTASTT--AATPAAVPAGTTAAAAAA---AAAAAAA 291
+VA + P P+ A + T +TT AA P AV A AAAAA A AAA A
Sbjct: 877 AVAPISVPAPVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAAATA 936
Query: 292 AVTSGVA 298
A S A
Sbjct: 937 AAVSPAA 943
Score = 34.3 bits (77), Expect = 0.14
Identities = 23/76 (30%), Positives = 34/76 (44%)
Query: 223 TLVACFMTLVIVVWSVAALIWPVPIIAGFLPNGMEQRRTTASTTAATPAAVPAGTTAAAA 282
T A +T +V + A+ A P+ T A+ + A +PA + A+A
Sbjct: 897 TATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASA 956
Query: 283 AAAAAAAAAAVTSGVA 298
AA A +AAAA VA
Sbjct: 957 AAVAPSAAAAAAVQVA 972
Score = 33.5 bits (75), Expect = 0.23
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 258 QRRTTASTTAAT-PAAVPAGTTAAAAAAAAAAAAAAVTS 295
+R T ++ TAA P +VPA AAA AAA A AA +T+
Sbjct: 867 ERGTESNKTAAVAPISVPAPVAAAATAAAITATAATITT 905
Score = 30.0 bits (66), Expect = 2.6
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Query: 6 AALLAAACPLPPVRGGAADA--PGLLG-VPSNASVNASSADEPIAPRL----LASAAPGP 58
AA AAA P P A A P G +P+ ASV +++A P A +A AAP P
Sbjct: 919 AAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAP 978
Query: 59 PERPG----PEEAAAAAA 72
P P AAA A+
Sbjct: 979 VPAPALVPVPAPAAAQAS 996
Score = 29.3 bits (64), Expect = 4.4
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 255 GMEQRRTTASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTS 295
G E +T A + PA V A TAAA A AA + +
Sbjct: 869 GTESNKTAAVAPISVPAPVAAAATAAAITATAATITTTMVA 909
Score = 28.9 bits (63), Expect = 5.8
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 13/81 (16%)
Query: 220 IESTLVACFMTLVIVVWSVAALIWPVPIIAGFLPNGMEQRRTTASTTAATPAAVPAGTTA 279
I +T+VA V + AA P P T A+T AA A A
Sbjct: 903 ITTTMVAAAPVAVAAAAAPAAAAAPSPA-------------TAAATAAAVSPAAAGQIPA 949
Query: 280 AAAAAAAAAAAAAVTSGVATK 300
AA+ A+AAA A + + A +
Sbjct: 950 AASVASAAAVAPSAAAAAAVQ 970
>gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens]
Length = 271
Score = 36.6 bits (83), Expect = 0.028
Identities = 46/169 (27%), Positives = 65/169 (38%), Gaps = 18/169 (10%)
Query: 33 SNASVNASSADEPIAPRLLASAAPGPPERPGPEEAAAA-----AAPCNISVQRQMLSSLL 87
S +S ++SS P+ P+ P E PGP + A A P Q+Q L +
Sbjct: 51 STSSTSSSSTTAPLLPKAAREKPEAPAEPPGPGPGSGAHPGGSARPDAKEEQQQQLRRKI 110
Query: 88 VRWGRPRGFQCDL--------LLFSTNAHGRAFFAAAFHRVGPPLLIEHLGLAAGGAQQD 139
R R +L +L + AH + ++ LL + L G + Q+
Sbjct: 111 NSRERKRMQDLNLAMDALREVILPYSAAHCQGAPGRKLSKIATLLLARNYILLLGSSLQE 170
Query: 140 LRLCVGCGWVRGRRTGRLRPAAAPSAAAATAGAPTALPAYPAAEPPGPL 188
LR +G G G RL A P AAA + L A A PP L
Sbjct: 171 LRRALGEG--AGPAAPRLLLAGLPLLAAAPG---SVLLAPGAVGPPDAL 214
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 35.8 bits (81), Expect = 0.047
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 8 LLAAACPLPPVRGGA-ADAPGLLGVPSNASVNASSADEPIAPRLLASAAPGP-PERPGPE 65
L+A PL P A + APG P +A+ A++A A AS++ GP P P
Sbjct: 90 LMAHPAPLAPGAASAYSSAPG--EAPPSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGA 147
Query: 66 EAAAAAAPCNISVQ 79
EAA +PC+ + Q
Sbjct: 148 EAAKQCSPCSAAAQ 161
Score = 35.4 bits (80), Expect = 0.062
Identities = 19/33 (57%), Positives = 21/33 (63%)
Query: 263 ASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTS 295
AS ++ P P AAAAAAAAAAAAAA S
Sbjct: 102 ASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAAS 134
Score = 30.8 bits (68), Expect = 1.5
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 12/58 (20%)
Query: 247 IIAGFLPNGMEQRRTTASTTAAT------------PAAVPAGTTAAAAAAAAAAAAAA 292
++A L ME A+ AA PAA AG + AAAAAAAAAAA
Sbjct: 26 LVADELNKNMEGAAAAAAAAAAAAAAGAGGGGFPHPAAAAAGGNFSVAAAAAAAAAAA 83
Score = 30.4 bits (67), Expect = 2.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 268 ATPAAVPAGTTAAAAAAAAAAAAAAVTSGVA 298
A P+A A AAAAAAAAAAA+++ G A
Sbjct: 112 APPSAAAAAAAAAAAAAAAAAASSSGGPGPA 142
Score = 29.3 bits (64), Expect = 4.4
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 254 NGMEQRRTTASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTSGVAT 299
N M A A+ ++ P +AAAAAAAAAAAA + A+
Sbjct: 89 NLMAHPAPLAPGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAAS 134
Score = 28.9 bits (63), Expect = 5.8
Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 16/83 (19%)
Query: 6 AALLAAACPLPPVRGGAADAPGLLGVPSNASVNASSA----------------DEPIAPR 49
AA AAA GG P N SV A++A P+AP
Sbjct: 41 AAAAAAAAAAAGAGGGGFPHPAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLAPG 100
Query: 50 LLASAAPGPPERPGPEEAAAAAA 72
++ + P E P AAAAAA
Sbjct: 101 AASAYSSAPGEAPPSAAAAAAAA 123
>gi|134142824 forkhead box D2 [Homo sapiens]
Length = 495
Score = 35.8 bits (81), Expect = 0.047
Identities = 31/85 (36%), Positives = 37/85 (43%), Gaps = 21/85 (24%)
Query: 14 PLPP------------VRGGAADA--PGLLGVPSNASVNASSADEPIAPRLLASAAPGPP 59
PLPP +RGGAA A PG +P A+ A +A + PGP
Sbjct: 227 PLPPPHPHPHPHPELLLRGGAAAAGDPGAF-LPGFAAYGAYGYGYGLALPAYGAPPPGPA 285
Query: 60 ERPGPEE------AAAAAAPCNISV 78
P P AAAAAAPC +SV
Sbjct: 286 PHPHPHPHAFAFAAAAAAAPCQLSV 310
>gi|151301228 formin binding protein 3 [Homo sapiens]
Length = 930
Score = 35.8 bits (81), Expect = 0.047
Identities = 20/39 (51%), Positives = 23/39 (58%)
Query: 261 TTASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTSGVAT 299
T TT +T AA A AAAAAAAAAAAA + +T
Sbjct: 235 TEIPTTMSTMAAAEAAAAVVAAAAAAAAAAAAANANAST 273
Score = 33.5 bits (75), Expect = 0.23
Identities = 20/38 (52%), Positives = 23/38 (60%)
Query: 261 TTASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTSGVA 298
TT ST AA AA AAAAAAAAAAA A ++ +
Sbjct: 239 TTMSTMAAAEAAAAVVAAAAAAAAAAAAANANASTSAS 276
Score = 29.6 bits (65), Expect = 3.4
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 257 EQRRTTASTTAATPAAVPA--GTTAAAAAAAAAAAAAAVTSGVA 298
++ TT ST +P T AAA AAAA AAAA + A
Sbjct: 221 QEECTTTSTAPVPTTEIPTTMSTMAAAEAAAAVVAAAAAAAAAA 264
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 35.8 bits (81), Expect = 0.047
Identities = 30/63 (47%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 10 AAACPLPPVRGGA-ADAPGLLGVPSNASVNASSADEPIAPRLLASAAPGPPERPGPEEAA 68
A A PLPPV A A AP L S AS S E ASAAPG P PGP A
Sbjct: 1597 APATPLPPVPPPAVAAAPPTLD--STASSLTSYDSEVATLTQGASAAPGDPHPPGPPAPA 1654
Query: 69 AAA 71
A A
Sbjct: 1655 APA 1657
>gi|157151759 hypothetical protein LOC642587 [Homo sapiens]
Length = 102
Score = 35.8 bits (81), Expect = 0.047
Identities = 24/44 (54%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 254 NGMEQRRTTAST---TAATPAAVPAGTTAAAAAAAAAAAAAAVT 294
+G++ RR A +AAT A T AAAAAAAAAAAAA VT
Sbjct: 57 SGVKFRRHGADNHEASAATATTAAATTVAAAAAAAAAAAAARVT 100
Score = 31.2 bits (69), Expect = 1.2
Identities = 18/32 (56%), Positives = 19/32 (59%)
Query: 263 ASTTAATPAAVPAGTTAAAAAAAAAAAAAAVT 294
AS AT AA AAAAAAAAAAA +T
Sbjct: 71 ASAATATTAAATTVAAAAAAAAAAAAARVTLT 102
Score = 28.5 bits (62), Expect = 7.6
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 251 FLPNGMEQRRTTASTTAATPAAVPAGTTAAAAAAAAA 287
F +G + +A+T A A AAAAAAAAA
Sbjct: 61 FRRHGADNHEASAATATTAAATTVAAAAAAAAAAAAA 97
>gi|17402888 neuronal pentraxin receptor [Homo sapiens]
Length = 500
Score = 35.0 bits (79), Expect = 0.081
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 4 LLAALLAAACPLPPVRGGAADAPGLLGVPSNASVNASSADEPIAPRLL-----ASAAPGP 58
+LA L A C + V A+ A L G NASV + +A P R L A + GP
Sbjct: 12 MLAFLGAVICIIASVPLAASPARALPGGADNASVASGAAASPGPQRSLSALHGAGGSAGP 71
Query: 59 PERPGPEEAAAAAAP 73
P PG A+A P
Sbjct: 72 PALPGAPAASAHPLP 86
>gi|187960059 syndecan 3 [Homo sapiens]
Length = 442
Score = 35.0 bits (79), Expect = 0.081
Identities = 19/49 (38%), Positives = 22/49 (44%)
Query: 246 PIIAGFLPNGMEQRRTTASTTAATPAAVPAGTTAAAAAAAAAAAAAAVT 294
P++ +P QR TT STT AT AA G A A A A T
Sbjct: 142 PLVVTEVPEEPSQRATTVSTTMATTAATSTGDPTVATVPATVATATPST 190
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 35.0 bits (79), Expect = 0.081
Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 253 PNGMEQRR---TTASTTAATPAAVPAGTTAAAAAAAAAAAAA 291
P +E+ + TTA TT A AAVP TA AAAA AAA+
Sbjct: 271 PEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAAS 312
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
Length = 1132
Score = 35.0 bits (79), Expect = 0.081
Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 253 PNGMEQRR---TTASTTAATPAAVPAGTTAAAAAAAAAAAAA 291
P +E+ + TTA TT A AAVP TA AAAA AAA+
Sbjct: 256 PEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAAS 297
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
[Homo sapiens]
Length = 1147
Score = 35.0 bits (79), Expect = 0.081
Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 253 PNGMEQRR---TTASTTAATPAAVPAGTTAAAAAAAAAAAAA 291
P +E+ + TTA TT A AAVP TA AAAA AAA+
Sbjct: 271 PEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAAS 312
>gi|210031233 PR domain containing 6 [Homo sapiens]
Length = 595
Score = 35.0 bits (79), Expect = 0.081
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 244 PVPIIAGFLPNGMEQRRTTASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTSGVA 298
P P A P+ + R + S+ ++TPA+ + T+A++A++ AAAAAAA +G++
Sbjct: 57 PPPERAEPPPDSLRPRPASLSSASSTPAS--SSTSASSASSCAAAAAAAALAGLS 109
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 35.0 bits (79), Expect = 0.081
Identities = 52/197 (26%), Positives = 67/197 (34%), Gaps = 34/197 (17%)
Query: 20 GGAADAPGLLGVPSNASVNASSADEPIAPRLLASAAPGP--PER-PGPEEAAAAAAPCNI 76
GG+++ P + S+ + +EP A +L PGP P R P P A A +
Sbjct: 450 GGSSEPPA-----APRSIKVEAVEEPEAAPILGPGEPGPQAPSRTPSPRSPAPARVKAEL 504
Query: 77 SVQRQMLSSLLVRWGRPRGFQCDLLLFSTNAHGRAF-FAAAFHRVGPPLLIEHLGLAAGG 135
S S + G +F +A A A + L + G AGG
Sbjct: 505 SSPTPGSSPVPGELGLAGALFLPQYVFGPDAAPPASEILAKMSELVHSRLQQGAGAGAGG 564
Query: 136 AQQDL-------RLCVGCG---------------WVRGRRTGRLRPAA-APSAAAATAGA 172
AQ L C C + GRR PAA P A A A
Sbjct: 565 AQTGLFPGAPKGATCFECEITFSNVNNYYVHKRLYCSGRRAPEDAPAARRPKAPPGPARA 624
Query: 173 PTALPAYPAA--EPPGP 187
P PA P A PGP
Sbjct: 625 PPGQPAEPDAPRSSPGP 641
>gi|9966803 poly(rC) binding protein 4 isoform a [Homo sapiens]
Length = 424
Score = 34.7 bits (78), Expect = 0.11
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 16 PPVRGGAADAPGLLGVPSNASVNASSADEPIAPRLLASAAPGPPERPGPEEAAAAAAPCN 75
PP+ PGLLG P S++ +P+ L A+PGPP A AAA +
Sbjct: 354 PPLTALPTAPPGLLGTPYAISLSNFIGLKPMPFLALPPASPGPPPGLAAYTAKMAAANGS 413
Query: 76 ISVQRQMLS 84
+RQ S
Sbjct: 414 KKAERQKFS 422
>gi|14670373 poly(rC) binding protein 4 isoform c [Homo sapiens]
Length = 403
Score = 34.7 bits (78), Expect = 0.11
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 16 PPVRGGAADAPGLLGVPSNASVNASSADEPIAPRLLASAAPGPPERPGPEEAAAAAAPCN 75
PP+ PGLLG P S++ +P+ L A+PGPP A AAA +
Sbjct: 333 PPLTALPTAPPGLLGTPYAISLSNFIGLKPMPFLALPPASPGPPPGLAAYTAKMAAANGS 392
Query: 76 ISVQRQMLS 84
+RQ S
Sbjct: 393 KKAERQKFS 401
>gi|14670369 poly(rC) binding protein 4 isoform c [Homo sapiens]
Length = 403
Score = 34.7 bits (78), Expect = 0.11
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 16 PPVRGGAADAPGLLGVPSNASVNASSADEPIAPRLLASAAPGPPERPGPEEAAAAAAPCN 75
PP+ PGLLG P S++ +P+ L A+PGPP A AAA +
Sbjct: 333 PPLTALPTAPPGLLGTPYAISLSNFIGLKPMPFLALPPASPGPPPGLAAYTAKMAAANGS 392
Query: 76 ISVQRQMLS 84
+RQ S
Sbjct: 393 KKAERQKFS 401
>gi|38016945 deformed epidermal autoregulatory factor 1 [Homo
sapiens]
Length = 565
Score = 34.7 bits (78), Expect = 0.11
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 5 LAALLAAACPLPPVRGGAADAPGLLGVPSNASVNASSADEPIAPRLLA----SAAPGPPE 60
+AA A A GG A+ P +L ++ +A S E PR+ A +A PG +
Sbjct: 19 VAAAAAVAAAAAAAAGGEAEEP-VLSRDEDSEEDADSEAERETPRVTAVAVMAAEPGHMD 77
Query: 61 R-----PGPEEAAAAAA 72
PGP+EAAAAAA
Sbjct: 78 MGAEALPGPDEAAAAAA 94
>gi|239749940 PREDICTED: similar to deformed epidermal
autoregulatory factor 1 [Homo sapiens]
Length = 426
Score = 34.7 bits (78), Expect = 0.11
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 5 LAALLAAACPLPPVRGGAADAPGLLGVPSNASVNASSADEPIAPRLLA----SAAPGPPE 60
+AA A A GG A+ P +L ++ +A S E PR+ A +A PG +
Sbjct: 19 VAAAAAVAAAAAAAAGGEAEEP-VLSRDEDSEEDADSEAERETPRVTAVAVMAAEPGHMD 77
Query: 61 R-----PGPEEAAAAAA 72
PGP+EAAAAAA
Sbjct: 78 MGAEALPGPDEAAAAAA 94
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 34.7 bits (78), Expect = 0.11
Identities = 18/54 (33%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 245 VPIIAGF-LPNGMEQRRTTASTTAATPAAVPAGTTAAAAAAAAAAAAAAVTSGV 297
+P+ +G LP+ +++S+++A+ ++ A AAAAAAAAA++ A + +G+
Sbjct: 107 MPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGLLAGL 160
Score = 31.6 bits (70), Expect = 0.89
Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 29/152 (19%)
Query: 161 AAPSAAAATAGAPTALPAYPAAEPPGPLWLQGEPLHFCCLDFSLEELQGEPGWRLNRKPI 220
++P AA + A P YPAA PP P G P S P N +
Sbjct: 18 SSPPLAALHSMAEMKTPLYPAAYPPLPA---GPPSSSS--SSSSSSSPSPPLGTHNPGGL 72
Query: 221 ESTLVACFMTLVIVVWSVAALIWPVPIIAGFLPNGMEQRRTTASTTAATPAAVP------ 274
+ +++L P ++ P+G+ + S A+ AA+P
Sbjct: 73 KPPATG----------GLSSLGSPPQQLSAATPHGINDILSRPSMPVASGAALPSASPSG 122
Query: 275 --------AGTTAAAAAAAAAAAAAAVTSGVA 298
A ++A+AAAAAAAAAAA S A
Sbjct: 123 SSSSSSSSASASSASAAAAAAAAAAAAASSPA 154
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 34.7 bits (78), Expect = 0.11
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 6 AALLAAACPLPPVRGGAADAPGLLGVPSNASVNASSADEPIAPRLLASAAPGPPERPGPE 65
A L +A PLPP GGAA P S++S ++SS+ + +S++ P P
Sbjct: 58 ALLTSAPLPLPPATGGAAPNPATTTAASSSSSSSSSSSS--SSSSASSSSSSSSSSPPPA 115
Query: 66 EAAAAAAP 73
A++ P
Sbjct: 116 SPPASSPP 123
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.133 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,798,612
Number of Sequences: 37866
Number of extensions: 797515
Number of successful extensions: 13563
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 264
Number of HSP's that attempted gapping in prelim test: 9528
Number of HSP's gapped (non-prelim): 3438
length of query: 300
length of database: 18,247,518
effective HSP length: 102
effective length of query: 198
effective length of database: 14,385,186
effective search space: 2848266828
effective search space used: 2848266828
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.