NPTXR 9587

Name: NPTXR	Sequence: fasta or formatted (500aa)		NCBI GI: 17402888
Description: neuronal pentraxin receptor		Referenced in: Neurons
Composition: Amino acid Percentage Count Longest homopolymer A alanine 15.2 76 3 C cysteine 1.6 8 1 D aspartate 4.6 23 1 E glutamate 5.8 29 2 F phenylalanine 2.4 12 1 G glycine 9.4 47 2 H histidine 2.2 11 2 I isoleucine 3.8 19 2 K lysine 2.8 14 1 L leucine 12.8 64 4 M methionine 1.4 7 1 N asparagine 2.2 11 2 P proline 7.4 37 2 Q glutamine 5.4 27 2 R arginine 6.0 30 2 S serine 6.4 32 2 T threonine 3.4 17 2 V valine 4.4 22 1 W tryptophan 1.6 8 1 Y tyrosine 1.2 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 neuronal pentraxin receptor NPTX2 0.403 neuronal pentraxin II NPTX1 0.355 neuronal pentraxin I precursor SVEP1 0.111 polydom GPR144 0.091 G protein-coupled receptor 144 C16orf38 0.081 hypothetical protein LOC390667 PTX3 0.073 pentraxin 3 CRP 0.054 C-reactive protein, pentraxin-related APCS 0.050 serum amyloid P component precursor LOC649458 0.039 PREDICTED: similar to hCG2036669 LOC649458 0.039 PREDICTED: similar to hCG2036669 LOC649458 0.039 PREDICTED: hypothetical protein LOC649458 GPR112 0.030 G-protein coupled receptor 112 ANKRD24 0.023 ankyrin repeat domain 24 SALL3 0.020 sal-like 3 TAF4 0.017 TBP-associated factor 4 CASKIN1 0.017 CASK interacting protein 1 COL1A1 0.017 alpha 1 type I collagen preproprotein COL3A1 0.017 collagen type III alpha 1 preproprotein COL2A1 0.016 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.016 collagen, type II, alpha 1 isoform 2 precursor [Hom... CNTROB 0.016 centrobin, centrosomal BRCA2 interacting protein is... CNTROB 0.016 centrobin, centrosomal BRCA2 interacting protein iso... FLJ22184 0.016 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.016 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.016 PREDICTED: hypothetical protein LOC80164 UNCX 0.016 UNC homeobox COL11A2 0.015 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.015 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.015 collagen, type XI, alpha 2 isoform 1 preproprotein ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.