SDC3 10144

Name: SDC3	Sequence: fasta or formatted (442aa)		NCBI GI: 187960059
Description: syndecan 3		Referenced in: Protein Glycosylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.3 59 3 C cysteine 0.0 0 0 D aspartate 4.3 19 3 E glutamate 7.7 34 3 F phenylalanine 2.5 11 1 G glycine 8.1 36 2 H histidine 0.5 2 1 I isoleucine 2.0 9 1 K lysine 2.5 11 3 L leucine 8.8 39 6 M methionine 0.9 4 1 N asparagine 0.9 4 1 P proline 12.7 56 2 Q glutamine 2.7 12 1 R arginine 5.0 22 2 S serine 6.6 29 2 T threonine 12.9 57 2 V valine 7.0 31 2 W tryptophan 0.2 1 1 Y tyrosine 1.4 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 syndecan 3 SDC1 0.104 syndecan 1 precursor SDC1 0.104 syndecan 1 precursor ZAN 0.078 zonadhesin isoform 3 ZAN 0.078 zonadhesin isoform 6 MUC2 0.077 mucin 2 precursor LOC100294420 0.077 PREDICTED: similar to mucin 2 SDC2 0.067 syndecan 2 precursor SDC4 0.054 syndecan 4 precursor PRG4 0.052 proteoglycan 4 isoform D PRG4 0.052 proteoglycan 4 isoform C PRG4 0.052 proteoglycan 4 isoform B PRG4 0.052 proteoglycan 4 isoform A KIAA0754 0.050 hypothetical protein LOC643314 MUC5AC 0.050 mucin 5AC MUC5B 0.050 mucin 5, subtype B, tracheobronchial LOC284297 0.050 hypothetical protein LOC284297 MUC17 0.047 mucin 17 LOC100132635 0.046 PREDICTED: similar to mucin 5, partial SELV 0.044 selenoprotein V LOC100134147 0.043 PREDICTED: hypothetical protein MUC7 0.043 mucin 7, secreted precursor LOC100131514 0.043 PREDICTED: similar to hCG1747327, partial MUC7 0.043 mucin 7, secreted precursor MUC7 0.043 mucin 7, secreted precursor FAM65A 0.043 hypothetical protein LOC79567 MUPCDH 0.041 mucin and cadherin-like isoform 1 MUC3A 0.041 PREDICTED: mucin 3A, intestinal LOC732156 0.041 PREDICTED: similar to Mucin-3A LOC730474 0.040 PREDICTED: hypothetical protein, partial Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.